RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 PPP4R3BQ5MIZ7 849 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 MAMDC4Q6UXC1 1216 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 TMEM63CQ9P1W3 806 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 MROH7Q68CQ1 1323 aa15.45■□□□□ 0.06
HERPUD1-202ENST00000344114 MCM3APO60318 1980 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 NOVP48745 357 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 CDK7P50613 346 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 GNL2Q13823 731 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 SAFBQ15424 915 aaKnown RBP eCLIP15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 KCNA10Q16322 511 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 TMEM240Q5SV17 173 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 MYSM1Q5VVJ2 828 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 C16orf59Q7L2K0 433 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 ATXN2LQ8WWM7 1075 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 PBX4Q9BYU1 374 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 KANSL2Q9H9L4 492 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 TFIP11Q9UBB9 837 aaKnown RBP15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 FAM184BQ9ULE4 1060 aa15.44■□□□□ 0.06
HERPUD1-202ENST00000344114 DNAJC25-GNG10A0A024R161 153 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 MYADML2A6NDP7 307 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 GOLGA6L4A6NEF3 574 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 DUSP11O75319 330 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 PLEKHA8P1O95397 391 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 YEATS4O95619 227 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 SNAI1O95863 264 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 MMP1P03956 469 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 TOP1P11387 765 aaKnown RBP15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 U2AF2P26368 475 aaKnown RBP eCLIP15.43■□□□□ 0.065e-8■■□□□ 14.2
HERPUD1-202ENST00000344114 PPIGQ13427 754 aaKnown RBP eCLIP15.43■□□□□ 0.061e-7■■□□□ 13.6
HERPUD1-202ENST00000344114 CCDC183Q5T5S1 534 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 USP28Q96RU2 1077 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 GAS2L1Q99501 681 aaPredicted RBP15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 TMEM47Q9BQJ4 181 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 GOPCQ9HD26 462 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 POLR3EQ9NVU0 708 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 RTEL1Q9NZ71 1219 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 RCOR1Q9UKL0 485 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 STX8Q9UNK0 236 aa15.43■□□□□ 0.06
HERPUD1-202ENST00000344114 IGKV6D-41A0A0C4DH26 115 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 KIF28PB7ZC32 967 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 LETM1O95202 739 aaPredicted RBP15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 PBX2P40425 430 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 FAM83BQ5T0W9 1011 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 CCDC174Q6PII3 467 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 ZNF467Q7Z7K2 595 aaPredicted RBP15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 GLT1D1Q96MS3 346 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 LZTS2Q9BRK4 669 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 FOXP1Q9H334 677 aaPredicted RBP15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 GJB4Q9NTQ9 266 aa15.42■□□□□ 0.06
HERPUD1-202ENST00000344114 ADCY6O43306 1168 aa15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 NASPP49321 788 aaPredicted RBP15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 PKN1Q16512 942 aa15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 CMTR1Q8N1G2 835 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 CCDC82Q8N4S0 544 aa15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 SRBD1Q8N5C6 995 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 CEP95Q96GE4 821 aa15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 TEX13BQ9BXU2 312 aa15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 UPF3AQ9H1J1 476 aaKnown RBP15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 THEGQ9P2T0 379 aa15.41■□□□□ 0.06
HERPUD1-202ENST00000344114 MYH7BA7E2Y1 1941 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 A0A0U1RQG5 324 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 GRXCR1A8MXD5 290 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 ATP2A1O14983 1001 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 ASGR1P07306 291 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 CSF2RAP15509 400 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 GJA9P57773 515 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 IRX5P78411 483 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 SNRNP48Q6IEG0 339 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 PSRC1Q6PGN9 363 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 FAM126BQ8IXS8 530 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 FAM177A1Q8N128 213 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 TMEM199Q8N511 208 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 PCSK9Q8NBP7 692 aaKnown RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 KCNG4Q8TDN1 519 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 ASB2Q96Q27 587 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 SLF1Q9BQI6 1058 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 PRDM12Q9H4Q4 367 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 MTMR4Q9NYA4 1195 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 MAD2L2Q9UI95 211 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 ZHX1Q9UKY1 873 aaPredicted RBP15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 RIPK3Q9Y572 518 aa15.4■□□□□ 0.06
HERPUD1-202ENST00000344114 ARVCFO00192 962 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 C6orf222P0C671 652 aaPredicted RBP15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 SCG2P13521 617 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 SMARCA1P28370 1054 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 MRE11P49959 708 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 NKX3-2P78367 333 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 ACVR2BQ13705 512 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 ADGRE1Q14246 886 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 STK38Q15208 465 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 PFKFB3Q16875 520 aaPredicted RBP15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 LRSAM1Q6UWE0 723 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 ZNF365Q70YC5 407 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 DIS3L2Q8IYB7 885 aaKnown RBP15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 PHF20Q9BVI0 1012 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 SPZ1Q9BXG8 430 aa15.39■□□□□ 0.05
HERPUD1-202ENST00000344114 BRMS1Q9HCU9 246 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms