RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 VTA1Q9NP79 307 aa9.21□□□□□ -0.93
HMGCR-202ENST00000343975 TBC1D22BQ9NU19 505 aa9.21□□□□□ -0.93
HMGCR-202ENST00000343975 SRRDQ9UH36 339 aa9.21□□□□□ -0.93
HMGCR-202ENST00000343975 FAM184BQ9ULE4 1060 aa9.21□□□□□ -0.93
HMGCR-202ENST00000343975 RIPK3Q9Y572 518 aa9.21□□□□□ -0.93
HMGCR-202ENST00000343975 SPTLC2O15270 562 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 TXKP42681 527 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 LRCH2Q5VUJ6 765 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 ZNF296Q8WUU4 475 aaPredicted RBP9.21□□□□□ -0.94
HMGCR-202ENST00000343975 TINF2Q9BSI4 451 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 PXMP2Q9NR77 195 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 GJB4Q9NTQ9 266 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 PCDHA12Q9UN75 941 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 MYH4Q9Y623 1939 aa9.21□□□□□ -0.94
HMGCR-202ENST00000343975 CTU1Q7Z7A3 348 aaKnown RBP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 FERMT2Q96AC1 680 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 FAM20AQ96MK3 541 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 CDK5RAP2Q96SN8 1893 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 DDX39AO00148 427 aaKnown RBP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 BRD1O95696 1058 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 SSBP05455 408 aaKnown RBP eCLIP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 TXNP10599 105 aaKnown RBP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 RARBP10826 455 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 SREBF1P36956 1147 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 CNTN2Q02246 1040 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 MIER3Q7Z3K6 550 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 GLG1Q92896 1179 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 GPRASP2Q96D09 838 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 CHMP2AO43633 222 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 MSCO60682 206 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 YEATS4O95619 227 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 HMGCRP04035 888 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 HSD17B4P51659 736 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 PKN2Q16513 984 aaKnown RBP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 FAM160B1Q5W0V3 765 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 PCNX4Q63HM2 1172 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 PPP4R3AQ6IN85 833 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 ARMCX2Q7L311 632 aa9.2□□□□□ -0.94
HMGCR-202ENST00000343975 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
HMGCR-202ENST00000343975 ZNF536O15090 1300 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 KINO60870 393 aaKnown RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 GRK4P32298 578 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 KRT76Q01546 638 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 NCAPH2Q6IBW4 605 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 MOXD1Q6UVY6 613 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 OXER1Q8TDS5 423 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 HMX1Q9NP08 348 aaPredicted RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 NKRFO15226 690 aaKnown RBP eCLIP9.19□□□□□ -0.942e-6■■■■□ 24.3
HMGCR-202ENST00000343975 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 GH1P01241 217 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 TAL1P17542 331 aaPredicted RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 DNM1Q05193 864 aaKnown RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 REPS2Q8NFH8 660 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 TBC1D5Q92609 795 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 MXRA8Q9BRK3 442 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 LRWD1Q9UFC0 647 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 PPP1R11O60927 126 aaPredicted RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 TGFB3P10600 412 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 AKR1A1P14550 325 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 U2AF2P26368 475 aaKnown RBP eCLIP9.19□□□□□ -0.943e-8■■■■□ 25.4
HMGCR-202ENST00000343975 PRKCZQ05513 592 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 MOGSQ13724 837 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 GRB14Q14449 540 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 NOM1Q5C9Z4 860 aaKnown RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 ZNF467Q7Z7K2 595 aaPredicted RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 CEP57L1Q8IYX8 460 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 CLEC4DQ8WXI8 215 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 ATP6V0A1Q93050 837 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 LRRC27Q9C0I9 530 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 ZNF215Q9UL58 517 aaPredicted RBP9.19□□□□□ -0.94
HMGCR-202ENST00000343975 NOD1Q9Y239 953 aa9.19□□□□□ -0.94
HMGCR-202ENST00000343975 ZNF646O15015 1829 aaPredicted RBP9.18□□□□□ -0.94
HMGCR-202ENST00000343975 VWA3AA6NCI4 1184 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 IPO5O00410 1097 aaKnown RBP9.18□□□□□ -0.94
HMGCR-202ENST00000343975 PEX10O60683 326 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 MARCKSP29966 332 aaPredicted RBP9.18□□□□□ -0.94
HMGCR-202ENST00000343975 TNFAIP2Q03169 654 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 PTGDRQ13258 359 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 PGM5Q15124 567 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 MIS18BP1Q6P0N0 1132 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 MEIS2O14770 477 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 TBX3O15119 743 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 XRCC5P13010 732 aaKnown RBP9.18□□□□□ -0.94
HMGCR-202ENST00000343975 JAK3P52333 1124 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 ST3GAL1Q11201 340 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 FAM133AQ8N9E0 248 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 OR6J1Q8NGC5 347 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 GGPS1O95749 300 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 MBD3O95983 291 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 SFNP31947 248 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 CCT6AP40227 531 aaKnown RBP9.18□□□□□ -0.94
HMGCR-202ENST00000343975 LBX1P52954 281 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 RESTQ13127 1097 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 ACVR2BQ13705 512 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 LAMC2Q13753 1193 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 IQSEC1Q6DN90 963 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 TYW1BQ6NUM6 668 aa9.18□□□□□ -0.94
HMGCR-202ENST00000343975 NIPA1Q7RTP0 329 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms