RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 A0A1W2PQ27 194 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 A0A1W2PQ64 194 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 A0A1W2PQD8 194 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 GCLCP48506 637 aaPredicted RBP11.02□□□□□ -0.65
CLDN18-202ENST00000343735 HSD17B4P51659 736 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 MOGSQ13724 837 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 PPP4R3AQ6IN85 833 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 GPAT2Q6NUI2 795 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 MYRIPQ8NFW9 859 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 P2RX7Q99572 595 aaKnown RBP11.02□□□□□ -0.65
CLDN18-202ENST00000343735 ANO3Q9BYT9 981 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 ACAD9Q9H845 621 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 PCDHB6Q9Y5E3 794 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 TESPA1A2RU30 521 aaPredicted RBP11.02□□□□□ -0.65
CLDN18-202ENST00000343735 PTPAQ15257 358 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 UBE2SQ16763 222 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 RIOX2Q8IUF8 465 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 ZNF579Q8NAF0 562 aaKnown RBP11.02□□□□□ -0.65
CLDN18-202ENST00000343735 RNF146Q9NTX7 359 aa11.02□□□□□ -0.65
CLDN18-202ENST00000343735 ZNF214Q9UL59 606 aaPredicted RBP11.02□□□□□ -0.65
CLDN18-202ENST00000343735 YY1P25490 414 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 CCNA1P78396 465 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 PLS1Q14651 629 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 TMEM132BQ14DG7 1078 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 LETM2Q2VYF4 491 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 EARS2Q5JPH6 523 aaKnown RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 USP17L6PQ6QN14 398 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 TRMT1LQ7Z2T5 733 aaKnown RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 CPLX3Q8WVH0 158 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 PARK7Q99497 189 aaKnown RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 TMEM260Q9NX78 707 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 CCNT1O60563 726 aaKnown RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 SREBF1P36956 1147 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 PRPHP41219 470 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 ATP2C1P98194 919 aaPredicted RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 SREBF2Q12772 1141 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 PNOCQ13519 176 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 ZNF174Q15697 407 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 REM2Q8IYK8 340 aaPredicted RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 ABT1Q9ULW3 272 aaKnown RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 SRPRBQ9Y5M8 271 aaKnown RBP11.01□□□□□ -0.65
CLDN18-202ENST00000343735 PTPRFP10586 1907 aa11.01□□□□□ -0.65
CLDN18-202ENST00000343735 PDHXO00330 501 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 MCM7P33993 719 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 RNF207Q6ZRF8 634 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 USP49Q70CQ1 688 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 RASAL3Q86YV0 1011 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 SMCR8Q8TEV9 937 aaPredicted RBP11□□□□□ -0.65
CLDN18-202ENST00000343735 CLEC4DQ8WXI8 215 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 PFASO15067 1338 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 B4DLN1 442 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 NEMFO60524 1076 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 CYP3A4P08684 503 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
CLDN18-202ENST00000343735 DPCR1Q3MIW9 517 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 XRRA1Q6P2D8 792 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
CLDN18-202ENST00000343735 SMYD4Q8IYR2 804 aaPredicted RBP11□□□□□ -0.65
CLDN18-202ENST00000343735 PYM1Q9BRP8 204 aaKnown RBP11□□□□□ -0.65
CLDN18-202ENST00000343735 SPATC1LQ9H0A9 340 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 OPLAHO14841 1288 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 SLC10A3P09131 477 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 PTPREP23469 700 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 PTGDRQ13258 359 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 ZNF771Q7L3S4 317 aaPredicted RBP11□□□□□ -0.65
CLDN18-202ENST00000343735 SHCBP1Q8NEM2 672 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 BRI3BPQ8WY22 251 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 MPHOSPH6Q99547 160 aaKnown RBP11□□□□□ -0.65
CLDN18-202ENST00000343735 RAB34Q9BZG1 259 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 MROH8Q9H579 483 aa11□□□□□ -0.65
CLDN18-202ENST00000343735 CYP3A7-CYP3A51PA0A087WV96 503 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 BTBD19C9JJ37 291 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 CMA1P23946 247 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 CYP3A7P24462 503 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 ZNF76P36508 570 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 HS1BP3Q53T59 392 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 FCHSD1Q86WN1 690 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 MRPS27Q92552 414 aaKnown RBP10.99□□□□□ -0.65
CLDN18-202ENST00000343735 HOMER2Q9NSB8 354 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 MARCH6O60337 910 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
CLDN18-202ENST00000343735 HOXA13P31271 388 aaPredicted RBP10.99□□□□□ -0.65
CLDN18-202ENST00000343735 TMEM266Q2M3C6 531 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 CCDC144BQ3MJ40 725 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 DTHD1Q6ZMT9 781 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 CCDC34Q96HJ3 373 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 PARP14Q460N5 1801 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 TBX3O15119 743 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 CIITAP33076 1130 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 LONP1P36776 959 aaKnown RBP10.99□□□□□ -0.65
CLDN18-202ENST00000343735 NSMFQ6X4W1 530 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 MTERF4Q7Z6M4 381 aaKnown RBP10.99□□□□□ -0.65
CLDN18-202ENST00000343735 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 PDCL2Q8N4E4 241 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 TMEM51Q9NW97 253 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 DDX25Q9UHL0 483 aaKnown RBP10.99□□□□□ -0.65
CLDN18-202ENST00000343735 STK24Q9Y6E0 443 aa10.99□□□□□ -0.65
CLDN18-202ENST00000343735 NFIBO00712 420 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms