RNA–Protein interactions for RNA: ENST00000343256.9

MUC1-204, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-204ENST00000343256 FAM50BQ9Y247 325 aa20.93■□□□□ 0.94
MUC1-204ENST00000343256 TSPY2A6NKD2 308 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 RPS6P62753 249 aaKnown RBP20.92■□□□□ 0.94
MUC1-204ENST00000343256 PPARAQ07869 468 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 GPM6BQ13491 265 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 CLUL1Q15846 466 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 LY6KQ17RY6 165 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 IER5LQ5T953 404 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 CHST3Q7LGC8 479 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 ALG1Q9BT22 464 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 FRMPD2Q68DX3 1309 aaPredicted RBP20.92■□□□□ 0.94
MUC1-204ENST00000343256 MICAL3Q7RTP6 2002 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 TECTAO75443 2155 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 MYO7AQ13402 2215 aa20.92■□□□□ 0.94
MUC1-204ENST00000343256 SLC3A2P08195 630 aaKnown RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 HTRA4P83105 476 aaPredicted RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 ZNF200P98182 395 aaPredicted RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 SYDE2Q5VT97 1194 aa20.91■□□□□ 0.94
MUC1-204ENST00000343256 TSHZ3Q63HK5 1081 aa20.91■□□□□ 0.94
MUC1-204ENST00000343256 SP7Q8TDD2 431 aaPredicted RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 SEC62Q99442 399 aaKnown RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 UPF3BQ9BZI7 483 aaKnown RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 NSUN3Q9H649 340 aaKnown RBP20.91■□□□□ 0.94
MUC1-204ENST00000343256 USP34Q70CQ2 3546 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 H3BNC9 293 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 LGR5O75473 907 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 AMHP03971 560 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 LTBRP36941 435 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 TRIM71Q2Q1W2 868 aaKnown RBP20.9■□□□□ 0.94
MUC1-204ENST00000343256 CCDC62Q6P9F0 684 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 RPAINQ86UA6 219 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 C7orf31Q8N865 590 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 DBF4BQ8NFT6 615 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 MPHOSPH6Q99547 160 aaKnown RBP20.9■□□□□ 0.94
MUC1-204ENST00000343256 NAPBQ9H115 298 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 GPCPD1Q9NPB8 672 aa20.9■□□□□ 0.94
MUC1-204ENST00000343256 ST18O60284 1047 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 CTDSPL2Q05D32 466 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 ARHGAP1Q07960 439 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 COL19A1Q14993 1142 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 PPP4R3BQ5MIZ7 849 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 BTNL9Q6UXG8 535 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 SEPT14Q6ZU15 432 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 DNERQ8NFT8 737 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 DCAF4Q8WV16 495 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 NACAP1Q9BZK3 213 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 ECHDC1Q9NTX5 307 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.89■□□□□ 0.93
MUC1-204ENST00000343256 C5orf42Q9H799 3197 aa20.89■□□□□ 0.93
MUC1-204ENST00000343256 GH1P01241 217 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 CASTP20810 708 aaKnown RBP20.88■□□□□ 0.93
MUC1-204ENST00000343256 PSEN2P49810 448 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 DLX2Q07687 328 aaPredicted RBP20.88■□□□□ 0.93
MUC1-204ENST00000343256 PTK7Q13308 1070 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 MKRN4PQ13434 485 aaPredicted RBP20.88■□□□□ 0.93
MUC1-204ENST00000343256 HERC4Q5GLZ8 1057 aaPredicted RBP20.88■□□□□ 0.93
MUC1-204ENST00000343256 RNF135Q8IUD6 432 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 TMEM192Q8IY95 271 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 SAMD11Q96NU1 681 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 LRRCC1Q9C099 1032 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 ATG2AQ2TAZ0 1938 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 NLRC5Q86WI3 1866 aa20.88■□□□□ 0.93
MUC1-204ENST00000343256 UPP2O95045 317 aa20.87■□□□□ 0.93
MUC1-204ENST00000343256 PTPN5P54829 565 aa20.87■□□□□ 0.93
MUC1-204ENST00000343256 HIC1Q14526 733 aa20.87■□□□□ 0.93
MUC1-204ENST00000343256 SMAD2Q15796 467 aaKnown RBP20.87■□□□□ 0.93
MUC1-204ENST00000343256 YME1L1Q96TA2 773 aa20.87■□□□□ 0.93
MUC1-204ENST00000343256 TRIOO75962 3097 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 MBTPS2O43462 519 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 RANBP6O60518 1105 aaKnown RBP20.86■□□□□ 0.93
MUC1-204ENST00000343256 ZFYP08048 801 aaPredicted RBP20.86■□□□□ 0.93
MUC1-204ENST00000343256 ZNF286BP0CG31 522 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 MFSD10Q14728 455 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 KIAA0753Q2KHM9 967 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 FBXO11Q86XK2 927 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 ZBTB40Q9NUA8 1239 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 FAM86C1Q9NVL1 165 aa20.86■□□□□ 0.93
MUC1-204ENST00000343256 CSPG5O95196 566 aa20.85■□□□□ 0.93
MUC1-204ENST00000343256 TCF15Q12870 199 aa20.85■□□□□ 0.93
MUC1-204ENST00000343256 DGKDQ16760 1214 aa20.85■□□□□ 0.93
MUC1-204ENST00000343256 EDAQ92838 391 aa20.85■□□□□ 0.93
MUC1-204ENST00000343256 B4DLN1 442 aa20.84■□□□□ 0.93
MUC1-204ENST00000343256 THPOP40225 353 aa20.84■□□□□ 0.93
MUC1-204ENST00000343256 NOVP48745 357 aa20.84■□□□□ 0.93
MUC1-204ENST00000343256 MRPL12P52815 198 aaKnown RBP20.84■□□□□ 0.93
MUC1-204ENST00000343256 PBXIP1Q96AQ6 731 aa20.84■□□□□ 0.93
MUC1-204ENST00000343256 POP1Q99575 1024 aaKnown RBP20.84■□□□□ 0.93
MUC1-204ENST00000343256 OSBPL7Q9BZF2 842 aa20.84■□□□□ 0.93
MUC1-204ENST00000343256 TMEM221A6NGB7 291 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 RSPH10B2B2RC85 870 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 M0R296 226 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 STXBP3O00186 592 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 HAS3O00219 553 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 RSPH10BP0C881 870 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 GTF2F1P35269 517 aaKnown RBP eCLIP20.83■□□□□ 0.93
MUC1-204ENST00000343256 HYAL1Q12794 435 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 CTC1Q2NKJ3 1217 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 USH1GQ495M9 461 aa20.83■□□□□ 0.93
MUC1-204ENST00000343256 DHX37Q8IY37 1157 aaKnown RBP20.83■□□□□ 0.93
MUC1-204ENST00000343256 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms