RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SPP2Q13103 211 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 KCNK18Q7Z418 384 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 GIMAP8Q8ND71 665 aaPredicted RBP22.43■■□□□ 1.18
RTN1-202ENST00000342503 CCDC47Q96A33 483 aaKnown RBP22.43■■□□□ 1.18
RTN1-202ENST00000342503 WDR18Q9BV38 432 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 INTS13Q9NVM9 706 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 CCPG1Q9ULG6 757 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 MAPK8IP1Q9UQF2 711 aa22.43■■□□□ 1.18
RTN1-202ENST00000342503 SSC5DA1L4H1 1573 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 PTPRAP18433 802 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 VCAM1P19320 739 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 CCT6AP40227 531 aaKnown RBP22.42■■□□□ 1.18
RTN1-202ENST00000342503 STAT3P40763 770 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 GSDMDP57764 484 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 HYIQ5T013 277 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 CDKAL1Q5VV42 579 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 ADSSL1Q8N142 457 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 AS3MTQ9HBK9 375 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 PICK1Q9NRD5 415 aa22.42■■□□□ 1.18
RTN1-202ENST00000342503 KDM3AQ9Y4C1 1321 aa22.41■■□□□ 1.18
RTN1-202ENST00000342503 MYMKA6NI61 221 aa22.41■■□□□ 1.18
RTN1-202ENST00000342503 MSH4O15457 936 aa22.41■■□□□ 1.18
RTN1-202ENST00000342503 NOLC1Q14978 699 aaKnown RBP eCLIP22.41■■□□□ 1.18
RTN1-202ENST00000342503 CYP2W1Q8TAV3 490 aa22.41■■□□□ 1.18
RTN1-202ENST00000342503 RPAP3Q9H6T3 665 aaPredicted RBP22.41■■□□□ 1.18
RTN1-202ENST00000342503 EXOC1Q9NV70 894 aa22.41■■□□□ 1.18
RTN1-202ENST00000342503 RNF181Q9P0P0 153 aa22.41■■□□□ 1.18
RTN1-202ENST00000342503 SLC26A4O43511 780 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 PDE4DQ08499 809 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 TPD52L1Q16890 204 aaPredicted RBP22.4■■□□□ 1.18
RTN1-202ENST00000342503 VSTM4Q8IW00 320 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 FAM20AQ96MK3 541 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 SYT17Q9BSW7 474 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 EHMT1Q9H9B1 1298 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 RBBP6Q7Z6E9 1792 aaKnown RBP22.4■■□□□ 1.18
RTN1-202ENST00000342503 FLOT1O75955 427 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 BACE1P56817 501 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 SPIRE1Q08AE8 756 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 ZNF280CQ8ND82 737 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 NT5C3AQ9H0P0 336 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 SLC38A10Q9HBR0 1119 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 PPP1R9AQ9ULJ8 1098 aa22.4■■□□□ 1.18
RTN1-202ENST00000342503 IGLV3-22A0A075B6J6 115 aa22.39■■□□□ 1.17
RTN1-202ENST00000342503 STIM1Q13586 685 aa22.39■■□□□ 1.17
RTN1-202ENST00000342503 KLRG1Q96E93 195 aa22.39■■□□□ 1.17
RTN1-202ENST00000342503 RAVER2Q9HCJ3 691 aaKnown RBP22.39■■□□□ 1.17
RTN1-202ENST00000342503 OFD1O75665 1012 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 HSD17B4P51659 736 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 UBXN2AP68543 259 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 PTPN21Q16825 1174 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 NCAPH2Q6IBW4 605 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 APTXQ7Z2E3 356 aaKnown RBP22.38■■□□□ 1.17
RTN1-202ENST00000342503 CPXCR1Q8N123 301 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 CLEC4DQ8WXI8 215 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 LRRC27Q9C0I9 530 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 SPTLC3Q9NUV7 552 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 KIAA1024Q9UPX6 916 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 PITPNM2Q9BZ72 1349 aa22.38■■□□□ 1.17
RTN1-202ENST00000342503 POTEB3A0JP26 581 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 POTECB2RU33 542 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 MED24O75448 989 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 YBX3P16989 372 aaKnown RBP eCLIP22.37■■□□□ 1.17
RTN1-202ENST00000342503 SUPT20HL1Q3ZLR7 823 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 ARMCX5Q6P1M9 558 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 POTEBQ6S5H4 581 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 UNC13DQ70J99 1090 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 DYMQ7RTS9 669 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 CCDC150Q8NCX0 1101 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 ADARB2Q9NS39 739 aaKnown RBP22.37■■□□□ 1.17
RTN1-202ENST00000342503 VAV3Q9UKW4 847 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 ZHX2Q9Y6X8 837 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 RLFQ13129 1914 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 A0A1B0GTH6 734 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 PVALEFA0A1B0GWK0 134 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 TRIM49BA6NDI0 452 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 E9PMD0 336 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 NFIBO00712 420 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 FCER1AP12319 257 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 ALAS1P13196 640 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 CCZ1BP86790 482 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 CCZ1P86791 482 aaPredicted RBP22.37■■□□□ 1.17
RTN1-202ENST00000342503 STK4Q13043 487 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 NR1I3Q14994 352 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 CNNM4Q6P4Q7 775 aa22.37■■□□□ 1.17
RTN1-202ENST00000342503 GTPBP4Q9BZE4 634 aaKnown RBP22.37■■□□□ 1.17
RTN1-202ENST00000342503 COL11A1P12107 1806 aaPredicted RBP22.36■■□□□ 1.17
RTN1-202ENST00000342503 PSMA7O14818 248 aa22.36■■□□□ 1.17
RTN1-202ENST00000342503 PRKG1Q13976 671 aa22.36■■□□□ 1.17
RTN1-202ENST00000342503 NOL9Q5SY16 702 aaKnown RBP22.36■■□□□ 1.17
RTN1-202ENST00000342503 HAUS3Q68CZ6 603 aa22.36■■□□□ 1.17
RTN1-202ENST00000342503 ERMNQ8TAM6 284 aa22.36■■□□□ 1.17
RTN1-202ENST00000342503 DDX12PQ92771 950 aa22.36■■□□□ 1.17
RTN1-202ENST00000342503 DHTKD1Q96HY7 919 aaPredicted RBP22.36■■□□□ 1.17
RTN1-202ENST00000342503 CTDP1Q9Y5B0 961 aaPredicted RBP22.36■■□□□ 1.17
RTN1-202ENST00000342503 ZBED4O75132 1171 aa22.35■■□□□ 1.17
RTN1-202ENST00000342503 PMS1P54277 932 aaKnown RBP22.35■■□□□ 1.17
RTN1-202ENST00000342503 MCF2L2Q86YR7 1114 aa22.35■■□□□ 1.17
RTN1-202ENST00000342503 HPS3Q969F9 1004 aa22.35■■□□□ 1.17
RTN1-202ENST00000342503 C12orf42Q96LP6 360 aa22.35■■□□□ 1.17
RTN1-202ENST00000342503 WDR90Q96KV7 1748 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms