RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 CCDC62Q6P9F0 684 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 TTC16Q8NEE8 873 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 MCPH1Q8NEM0 835 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 POMGNT1Q8WZA1 660 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 SLC10A4Q96EP9 437 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 MRPL47Q9HD33 250 aaKnown RBP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 SAR1BQ9Y6B6 198 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 JAK2O60674 1132 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 CYP2J2P51589 502 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 MYO1EQ12965 1108 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 PTGDRQ13258 359 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 SARM1Q6SZW1 724 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 AFAP1L1Q8TED9 768 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 COL3A1P02461 1466 aaPredicted RBP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 DNAJC21Q5F1R6 531 aaKnown RBP8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 POTEDQ86YR6 584 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 CACNA2D3Q8IZS8 1091 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.42□□□□□ -1.063e-9■■■■■ 78.5
ATP2B4-201ENST00000341360 TACC3Q9Y6A5 838 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 STK36Q9NRP7 1315 aa8.42□□□□□ -1.06
ATP2B4-201ENST00000341360 AFF2P51816 1311 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 SLC26A4O43511 780 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 RHOXF2BP0C7M4 288 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ARHGAP25P42331 645 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MAN2A1Q16706 1144 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 KYAT1Q16773 422 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 DENND2CQ68D51 928 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 BZW1Q7L1Q6 419 aaKnown RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 SPATS2Q86XZ4 545 aaKnown RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 PIGBQ92521 554 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 RHOXF2Q9BQY4 288 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ST7Q9NRC1 585 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 SLC8A2Q9UPR5 921 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ATF5Q9Y2D1 282 aaPredicted RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 A6NJR5 290 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 RNF40O75150 1001 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ADD1P35611 737 aaKnown RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 TNFAIP2Q03169 654 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MAEAQ7L5Y9 396 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 U2AF1L4Q8WU68 220 aaKnown RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 USP28Q96RU2 1077 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 SUGCTQ9HAC7 445 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 TBC1D22BQ9NU19 505 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 DAAM1Q9Y4D1 1078 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ABCB11O95342 1321 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 PRR36Q9H6K5 1346 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MMP10P09238 476 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 TROVE2P10155 538 aaKnown RBP eCLIP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 HSPA1LP34931 641 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 LRRC63Q05C16 580 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ALX1Q15699 326 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ARHGAP44Q17R89 818 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 KCNV1Q6PIU1 500 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 TTLL11Q8NHH1 800 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 VCX3BQ9H321 246 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 KMT5AQ9NQR1 393 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 HERC5Q9UII4 1024 aaKnown RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MID2Q9UJV3 735 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 FEM1BQ9UK73 627 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 FRMPD2Q68DX3 1309 aaPredicted RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 BTBD18B2RXH4 712 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MYO1FO00160 1098 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ZWINTO95229 277 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 SLFN14P0C7P3 912 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MYL7Q01449 175 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 TRIM42Q8IWZ5 723 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 ANKRD7Q92527 254 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 SPON1Q9HCB6 807 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 GINM1Q9NU53 330 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 MAPK8IP1Q9UQF2 711 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 USTQ9Y2C2 406 aa8.41□□□□□ -1.06
ATP2B4-201ENST00000341360 CRB1P82279 1406 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 PASKQ96RG2 1323 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 PIK3CAP42336 1068 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 CDC42EP1Q00587 391 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 PTPN12Q05209 780 aaKnown RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 UAP1Q16222 522 aaPredicted RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 LONRF2Q1L5Z9 754 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 PPP4R1Q8TF05 950 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 MMS19Q96T76 1030 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 ALDH8A1Q9H2A2 487 aaPredicted RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 SNX25Q9H3E2 840 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 FAM207AQ9NSI2 230 aaPredicted RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 DDX41Q9UJV9 622 aaKnown RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 AFG3L2Q9Y4W6 797 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 SH2B2O14492 632 aaPredicted RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 CTIFO43310 598 aaKnown RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 KRT15P19012 456 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 SFNP31947 248 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 KRT76Q01546 638 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 NEDD9Q14511 834 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 SDCCAG8Q86SQ7 713 aaPredicted RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 CCDC24Q8N4L8 307 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 FAM20AQ96MK3 541 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 GCNAQ96QF7 691 aa8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 SEPT9Q9UHD8 586 aaPredicted RBP8.4□□□□□ -1.06
ATP2B4-201ENST00000341360 JRKLQ9Y4A0 524 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms