RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 STK4Q13043 487 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 UNC13DQ70J99 1090 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 CCDC114Q96M63 670 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 KRT12Q99456 494 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 UBA5Q9GZZ9 404 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 BARHL2Q9NY43 387 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
TRERF1-201ENST00000340840 LOC102724428A0A0B4J2F2 783 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 PVALEFA0A1B0GWK0 134 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 WNT7AO00755 349 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 SIK1P57059 783 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 ADGRA1Q86SQ6 560 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 CCDC125Q86Z20 511 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 TBCKQ8TEA7 893 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 WHAMMQ8TF30 809 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 C7orf25Q9BPX7 421 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 PCDHA6Q9UN73 950 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 PCDHA8Q9Y5H6 950 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 DUSP10Q9Y6W6 482 aa10.4□□□□□ -0.75
TRERF1-201ENST00000340840 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 FCER1AP12319 257 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 PRLRP16471 622 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 KLK7P49862 253 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 PMS1P54277 932 aaKnown RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 EHHADHQ08426 723 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 GRM1Q13255 1194 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 FAM26FQ5R3K3 315 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 CCDC24Q8N4L8 307 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 FLAD1Q8NFF5 587 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 CCDC26Q8TAB7 109 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 ZNF507Q8TCN5 953 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 TGFBRAP1Q8WUH2 860 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 TNFRSF25Q93038 417 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 NFU1Q9UMS0 254 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 E7EVH7 732 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 SYF2O95926 243 aaKnown RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 SERPING1P05155 500 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 HERC4Q5GLZ8 1057 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 MCTP2Q6DN12 878 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 CERS3Q8IU89 383 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 GUF1Q8N442 669 aaKnown RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 NSUN4Q96CB9 384 aaKnown RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 FAM84BQ96KN1 310 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 EYA3Q99504 573 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 KCNK3O14649 394 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 NR1D1P20393 614 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 ITIH3Q06033 890 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 MTMR3Q13615 1198 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 WDR59Q6PJI9 974 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 ZNF804AQ7Z570 1209 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 MAPKAPK5Q8IW41 473 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 TEX11Q8IYF3 940 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 STAG2Q8N3U4 1231 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 UBLCP1Q8WVY7 318 aaPredicted RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 SEPT11Q9NVA2 429 aaKnown RBP10.39□□□□□ -0.75
TRERF1-201ENST00000340840 MINPP1Q9UNW1 487 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 CLEC11AQ9Y240 323 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 COL4A3BPQ9Y5P4 624 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 SPATA31A5Q5VU36 1347 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 SPATA31A7Q8IWB4 1347 aa10.39□□□□□ -0.75
TRERF1-201ENST00000340840 GOLGA6L10A0A0M3HER8 536 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 MRPL12P52815 198 aaKnown RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 PSMD2Q13200 908 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 PRPF4BQ13523 1007 aaKnown RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 TPTE2Q6XPS3 522 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 DYNLL2Q96FJ2 89 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 DMGDHQ9UI17 866 aaKnown RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 NCK2O43639 380 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 FTCDO95954 541 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 PRDX5P30044 214 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 ORC2Q13416 577 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 CPLX4Q7Z7G2 160 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 IRF2BP1Q8IU81 584 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 NELFCDQ8IXH7 590 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 ERMNQ8TAM6 284 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 NAP1L4Q99733 375 aaKnown RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 GOPCQ9HD26 462 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 HMGB1P1B2RPK0 211 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 SOCS7O14512 581 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 FLOT1O75955 427 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 IKQ13123 557 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 ERFEQ4G0M1 354 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 TBC1D5Q92609 795 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 CABS1Q96KC9 395 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 MTRQ99707 1265 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 NT5C3AQ9H0P0 336 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 CAPN6Q9Y6Q1 641 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 SIPA1L3O60292 1781 aaPredicted RBP10.38□□□□□ -0.75
TRERF1-201ENST00000340840 TNS2Q63HR2 1409 aa10.38□□□□□ -0.75
TRERF1-201ENST00000340840 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 SSU72P8A0A1W2PR75 194 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 GFPT1Q06210 699 aaPredicted RBP10.37□□□□□ -0.75
TRERF1-201ENST00000340840 LRRC41Q15345 812 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 PROM2Q8N271 834 aa10.37□□□□□ -0.75
TRERF1-201ENST00000340840 MYCBPQ99417 103 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms