RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 USP14P54578 494 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 COG2Q14746 738 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 LRSAM1Q6UWE0 723 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 METTL16Q86W50 562 aaKnown RBP13.87□□□□□ -0.19
ATXN3-201ENST00000340660 DZIP1Q86YF9 867 aaKnown RBP13.87□□□□□ -0.19
ATXN3-201ENST00000340660 CCDC105Q8IYK2 499 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 TSC1Q92574 1164 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 RTKNQ9BST9 563 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 SIL1Q9H173 461 aa13.87□□□□□ -0.19
ATXN3-201ENST00000340660 CDV3Q9UKY7 258 aaKnown RBP13.87□□□□□ -0.19
ATXN3-201ENST00000340660 LOC400499M0QZD8 3231 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 GH2P01242 217 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 PROS1P07225 676 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 GPNMBQ14956 572 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
ATXN3-201ENST00000340660 PPM1JQ5JR12 505 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 CWF19L1Q69YN2 538 aaKnown RBP13.86□□□□□ -0.19
ATXN3-201ENST00000340660 TREML4Q6UXN2 200 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 MSL3Q8N5Y2 521 aaKnown RBP13.86□□□□□ -0.19
ATXN3-201ENST00000340660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.86□□□□□ -0.19
ATXN3-201ENST00000340660 FOXJ1Q92949 421 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 IGFLR1Q9H665 355 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 SENP2Q9HC62 589 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 HOXC10Q9NYD6 342 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 CLEC1BQ9P126 229 aa13.86□□□□□ -0.19
ATXN3-201ENST00000340660 USP15Q9Y4E8 981 aaPredicted RBP13.86□□□□□ -0.19
ATXN3-201ENST00000340660 PTGS1P23219 599 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 ADAM15Q13444 863 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 MAMDC4Q6UXC1 1216 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 ZBTB33Q86T24 672 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 ZNF384Q8TF68 577 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 SMOC2Q9H3U7 446 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 POLR3EQ9NVU0 708 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 ANGPTL2Q9UKU9 493 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 ZMIZ1Q9ULJ6 1067 aa13.85□□□□□ -0.19
ATXN3-201ENST00000340660 PI15O43692 258 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 BRD1O95696 1058 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 SUPT20HL2P0C7V6 817 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 ZNF853P0CG23 659 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 MB21D1Q8N884 522 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 KREMEN2Q8NCW0 462 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
ATXN3-201ENST00000340660 DSPP15924 2871 aaKnown RBP13.84□□□□□ -0.19
ATXN3-201ENST00000340660 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.83□□□□□ -0.2
ATXN3-201ENST00000340660 NDUFV1P49821 464 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 COASYQ13057 564 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 FSCN1Q16658 493 aaKnown RBP13.83□□□□□ -0.2
ATXN3-201ENST00000340660 DTWD2Q8NBA8 298 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 ATG4CQ96DT6 458 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 SAMD11Q96NU1 681 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 INSL6Q9Y581 213 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 IGF2RP11717 2491 aa13.83□□□□□ -0.2
ATXN3-201ENST00000340660 CAPN5O15484 640 aaPredicted RBP13.82□□□□□ -0.2
ATXN3-201ENST00000340660 SLC25A27O95847 323 aa13.82□□□□□ -0.2
ATXN3-201ENST00000340660 TMEM132BQ14DG7 1078 aa13.82□□□□□ -0.2
ATXN3-201ENST00000340660 C4orf48Q5BLP8 95 aa13.82□□□□□ -0.2
ATXN3-201ENST00000340660 SUMF1Q8NBK3 374 aa13.82□□□□□ -0.2
ATXN3-201ENST00000340660 TANGO6Q9C0B7 1094 aa13.82□□□□□ -0.2
ATXN3-201ENST00000340660 ITPR1Q14643 2758 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 PRR5-ARHGAP8B1AHC4 643 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
ATXN3-201ENST00000340660 ARHGAP8P85298 464 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 NNTQ13423 1086 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 TRIM46Q7Z4K8 759 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 FBXO11Q86XK2 927 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 TMEM192Q8IY95 271 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 UBALD2Q8IYN6 164 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 TSPYL6Q8N831 410 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 RETREG2Q8NC44 543 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 KIFC2Q96AC6 838 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 DHX36Q9H2U1 1008 aaKnown RBP13.81□□□□□ -0.2
ATXN3-201ENST00000340660 KDM4CQ9H3R0 1056 aa13.81□□□□□ -0.2
ATXN3-201ENST00000340660 WDFY3Q8IZQ1 3526 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 TAF4O00268 1085 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 PMLP29590 882 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 MECOMQ03112 1051 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 RING1Q06587 406 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 MTMR3Q13615 1198 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 CNKSR3Q6P9H4 555 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 FOXP4Q8IVH2 680 aaPredicted RBP13.8□□□□□ -0.2
ATXN3-201ENST00000340660 FAM174AQ8TBP5 190 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 KAZALD1Q96I82 304 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 KATNBL1Q9H079 304 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 MFSD1Q9H3U5 465 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 ABHD16BQ9H3Z7 469 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 DENND2AQ9ULE3 1009 aa13.8□□□□□ -0.2
ATXN3-201ENST00000340660 GNEQ9Y223 722 aaKnown RBP13.8□□□□□ -0.2
ATXN3-201ENST00000340660 MAP4K4O95819 1239 aaPredicted RBP13.79□□□□□ -0.2
ATXN3-201ENST00000340660 AOC1P19801 751 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
ATXN3-201ENST00000340660 NFX1Q12986 1120 aaKnown RBP13.79□□□□□ -0.2
ATXN3-201ENST00000340660 RAB3GAP1Q15042 981 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 TLK2Q86UE8 772 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 RIOX2Q8IUF8 465 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 TEX11Q8IYF3 940 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 ZGPATQ8N5A5 531 aaKnown RBP13.79□□□□□ -0.2
ATXN3-201ENST00000340660 FLCNQ8NFG4 579 aa13.79□□□□□ -0.2
ATXN3-201ENST00000340660 SUSD6Q92537 303 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms