RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 TBC1D5Q92609 795 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 TCHPQ9BT92 498 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 FGFR1OPO95684 399 aaKnown RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 PLCG1P19174 1290 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 GTF2A2P52657 109 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 BRDTQ58F21 947 aaPredicted RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 XKR9Q5GH70 373 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 AK8Q96MA6 479 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 MMRN2Q9H8L6 949 aa13.1□□□□□ -0.31
C2orf88-201ENST00000340623 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.1□□□□□ -0.31
C2orf88-201ENST00000340623 ESYT2A0FGR8 921 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 SOCS7O14512 581 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 DKC1O60832 514 aaKnown RBP eCLIP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CACNB1Q02641 598 aaPredicted RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 STXBP2Q15833 593 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 TRMT44Q8IYL2 757 aaKnown RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 RABGAP1Q9Y3P9 1069 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CXCL11O14625 94 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 USP2O75604 605 aaPredicted RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 POTEIP0CG38 1075 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 POTEJP0CG39 1038 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 PPATQ06203 517 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CHADLQ6NUI6 762 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 MYCT1Q8N699 235 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 TMEM87AQ8NBN3 555 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 TMEM60Q9H2L4 133 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 GOLPH3LQ9H4A5 285 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CTNND2Q9UQB3 1225 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 EP400Q96L91 3159 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CTTNQ14247 550 aaKnown RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CEP55Q53EZ4 464 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 EARS2Q5JPH6 523 aaKnown RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 NELFCDQ8IXH7 590 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CDHR1Q96JP9 859 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 PARK7Q99497 189 aaKnown RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 P2RX7Q99572 595 aaKnown RBP13.09□□□□□ -0.31
C2orf88-201ENST00000340623 CBX8Q9HC52 389 aa13.09□□□□□ -0.31
C2orf88-201ENST00000340623 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 N4BP3O15049 544 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 ERCC3P19447 782 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 JAG1P78504 1218 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 ATP2C1P98194 919 aaPredicted RBP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 FMR1Q06787 632 aaKnown RBP eCLIP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 PTPN21Q16825 1174 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 USP49Q70CQ1 688 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 CCDC112Q8NEF3 446 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 LARP4BQ92615 738 aaKnown RBP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 TRPC6Q9Y210 931 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 STK24Q9Y6E0 443 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 V9GYY5 206 aaPredicted RBP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 CNTNAP1P78357 1384 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 IPO5O00410 1097 aaKnown RBP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 CYP2C8P10632 490 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 TNNT1P13805 278 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 CASP1P29466 404 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 USP11P51784 963 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 MCM6Q14566 821 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 TAAR1Q96RJ0 339 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 EMILIN3Q9NT22 766 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 SFPQP23246 707 aaKnown RBP eCLIP13.08□□□□□ -0.32
C2orf88-201ENST00000340623 HERVK_113P62684 666 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 SHC4Q6S5L8 630 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 HS2ST1Q7LGA3 356 aa13.08□□□□□ -0.32
C2orf88-201ENST00000340623 VWA5AO00534 786 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 GRIN1Q05586 938 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 FKBP15Q5T1M5 1219 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 CNNM4Q6P4Q7 775 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 MB21D1Q8N884 522 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 COL4A1P02462 1669 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 PITPNM2Q9BZ72 1349 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 NR3C2P08235 984 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 SLFN14P0C7P3 912 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 DSG3P32926 999 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 MYL5Q02045 173 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 RESP18Q5W5W9 173 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 GPRC5AQ8NFJ5 357 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 WDR18Q9BV38 432 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 ASCC2Q9H1I8 757 aaPredicted RBP13.07□□□□□ -0.32
C2orf88-201ENST00000340623 LRP5O75197 1615 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 TNPO2O14787 897 aaKnown RBP13.07□□□□□ -0.32
C2orf88-201ENST00000340623 USO1O60763 962 aaKnown RBP13.07□□□□□ -0.32
C2orf88-201ENST00000340623 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
C2orf88-201ENST00000340623 NLRP12P59046 1061 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 LRMPQ12912 555 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 UVSSAQ2YD98 709 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 PIGOQ8TEQ8 1089 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 SUGCTQ9HAC7 445 aa13.07□□□□□ -0.32
C2orf88-201ENST00000340623 FBXO2Q9UK22 296 aaPredicted RBP13.07□□□□□ -0.32
C2orf88-201ENST00000340623 GTPBP6O43824 516 aaPredicted RBP13.06□□□□□ -0.32
C2orf88-201ENST00000340623 TOB1P50616 345 aaPredicted RBP13.06□□□□□ -0.32
C2orf88-201ENST00000340623 UBASH3AP57075 661 aa13.06□□□□□ -0.32
C2orf88-201ENST00000340623 IGBP1P78318 339 aa13.06□□□□□ -0.32
C2orf88-201ENST00000340623 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.06□□□□□ -0.32
C2orf88-201ENST00000340623 MNS1Q8NEH6 495 aa13.06□□□□□ -0.32
C2orf88-201ENST00000340623 IPO4Q8TEX9 1081 aaKnown RBP13.06□□□□□ -0.32
C2orf88-201ENST00000340623 MRPL44Q9H9J2 332 aaKnown RBP13.06□□□□□ -0.32
C2orf88-201ENST00000340623 POLD4Q9HCU8 107 aa13.06□□□□□ -0.32
C2orf88-201ENST00000340623 PDHXO00330 501 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms