RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NFU1Q9UMS0 254 aa15.95■□□□□ 0.14
CPSF7-201ENST00000340437 CICQ96RK0 1608 aaPredicted RBP15.94■□□□□ 0.14
CPSF7-201ENST00000340437 MYH10P35580 1976 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 MMTAG2Q9BU76 263 aaKnown RBP15.94■□□□□ 0.14
CPSF7-201ENST00000340437 SH3GLB2Q9NR46 395 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 DUOX1Q9NRD9 1551 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 KRT14P02533 472 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 NOP2P46087 812 aaKnown RBP15.94■□□□□ 0.14
CPSF7-201ENST00000340437 SF3A3Q12874 501 aaKnown RBP eCLIP15.94■□□□□ 0.145e-6■■■□□ 15
CPSF7-201ENST00000340437 HLTFQ14527 1009 aaKnown RBP eCLIP15.94■□□□□ 0.14
CPSF7-201ENST00000340437 SBK1Q52WX2 424 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 LSM14BQ9BX40 385 aaKnown RBP15.94■□□□□ 0.14
CPSF7-201ENST00000340437 TTYH3Q9C0H2 523 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 EPB41L5Q9HCM4 733 aa15.94■□□□□ 0.14
CPSF7-201ENST00000340437 C6orf229H3BNL8 230 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 AGPSO00116 658 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 RIMBP2O15034 1052 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 HSF2BPO75031 334 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 PDCLQ13371 301 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 TTC31Q49AM3 519 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-201ENST00000340437 TSEN2Q8NCE0 465 aaKnown RBP15.93■□□□□ 0.14
CPSF7-201ENST00000340437 MTMR8Q96EF0 704 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 TSG101Q99816 390 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 SH2D4AQ9H788 454 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 FAM184BQ9ULE4 1060 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 DDX60Q8IY21 1712 aaKnown RBP15.93■□□□□ 0.14
CPSF7-201ENST00000340437 GRB10Q13322 594 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 TBC1D5Q92609 795 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 KRT12Q99456 494 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 CAPS2Q9BXY5 557 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 TSGA10Q9BZW7 698 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 ADAMTS1Q9UHI8 967 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 HYOU1Q9Y4L1 999 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 FLT1P17948 1338 aa15.93■□□□□ 0.14
CPSF7-201ENST00000340437 IBSPP21815 317 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-201ENST00000340437 BCCIPQ9P287 314 aaKnown RBP eCLIP15.93■□□□□ 0.14
CPSF7-201ENST00000340437 MKRN1Q9UHC7 482 aaKnown RBP15.93■□□□□ 0.14
CPSF7-201ENST00000340437 TRADDQ15628 312 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 MAATS1Q7Z4T9 603 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 RETREG2Q8NC44 543 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 CCDC43Q96MW1 224 aaKnown RBP15.92■□□□□ 0.14
CPSF7-201ENST00000340437 PALM3A6NDB9 673 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-201ENST00000340437 PPFIA4O75335 1185 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 PRPF6O94906 941 aaKnown RBP15.92■□□□□ 0.14
CPSF7-201ENST00000340437 MAN2A1Q16706 1144 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 TCERG1LQ5VWI1 586 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 RPGRIP1Q96KN7 1286 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 NOX5Q96PH1 765 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 C7orf25Q9BPX7 421 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 PALMO75781 387 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 HPDP32754 393 aaPredicted RBP15.92■□□□□ 0.14
CPSF7-201ENST00000340437 CARSP49589 748 aaKnown RBP15.92■□□□□ 0.14
CPSF7-201ENST00000340437 FAM133AQ8N9E0 248 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 PLAGL2Q9UPG8 496 aa15.92■□□□□ 0.14
CPSF7-201ENST00000340437 E9PMD0 336 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 HERC4Q5GLZ8 1057 aaPredicted RBP15.91■□□□□ 0.14
CPSF7-201ENST00000340437 ZMYND12Q9H0C1 365 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 BLOC1S4Q9NUP1 217 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 M0R2N6 131 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 EBAG9O00559 213 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 UFL1O94874 794 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 IRAK1P51617 712 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 AK8Q96MA6 479 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 PACSIN1Q9BY11 444 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 HEXIM1O94992 359 aaKnown RBP15.91■□□□□ 0.14
CPSF7-201ENST00000340437 FAM153BP0C7A2 387 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 KIAA0753Q2KHM9 967 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 FAM153CQ494X1 144 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 TTBK2Q6IQ55 1244 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 PACS2Q86VP3 889 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 PNMA5Q96PV4 448 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 ERGIC2Q96RQ1 377 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 FGFBP2Q9BYJ0 223 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 FAM153AQ9UHL3 310 aa15.91■□□□□ 0.14
CPSF7-201ENST00000340437 ANO9A1A5B4 782 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 TMCO5BA8MYB1 307 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 ADCY7P51828 1080 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 RBM5P52756 815 aaKnown RBP eCLIP15.9■□□□□ 0.14
CPSF7-201ENST00000340437 IKQ13123 557 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-201ENST00000340437 CLEC4GQ6UXB4 293 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 STIM2Q9P246 746 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 SHTN1A0MZ66 631 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 TARSL2A2RTX5 802 aaKnown RBP15.9■□□□□ 0.14
CPSF7-201ENST00000340437 CFAP58Q5T655 872 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 SFMBT2Q5VUG0 894 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 KCTD1Q719H9 257 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 CCDC84Q86UT8 332 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-201ENST00000340437 KIAA1024Q9UPX6 916 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 LAD1O00515 517 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 GLI1P08151 1106 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 SNAP25P60880 206 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 MFSD14BQ5SR56 506 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 DPP8Q6V1X1 898 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-201ENST00000340437 MYOCDQ8IZQ8 938 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 VIPAS39Q9H9C1 493 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 BMP2KQ9NSY1 1161 aaPredicted RBP15.9■□□□□ 0.14
CPSF7-201ENST00000340437 PANK4Q9NVE7 773 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
CPSF7-201ENST00000340437 UBAP1LF5GYI3 381 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms