RNA–Protein interactions for RNA: ENST00000340413.6

NUP43-201, Transcript of nucleoporin 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP43, Length 3,874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-201ENST00000340413 SMTNL1A8MU46 457 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
NUP43-201ENST00000340413 MCM7P33993 719 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 HMGCS2P54868 508 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 CEP55Q53EZ4 464 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 JAKMIP3Q5VZ66 844 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 SARM1Q6SZW1 724 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 NSUN6Q8TEA1 469 aaKnown RBP8.08□□□□□ -1.12
NUP43-201ENST00000340413 SYMPKQ92797 1274 aaKnown RBP8.08□□□□□ -1.12
NUP43-201ENST00000340413 OPTNQ96CV9 577 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 hCG_1642624A0A1W2PR95 340 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 STRNO43815 780 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 STAT3P40763 770 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 JAK3P52333 1124 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 POSTNQ15063 836 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 LETM2Q2VYF4 491 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 SPRYD7Q5W111 196 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 KRT79Q5XKE5 535 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 RNF207Q6ZRF8 634 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 RASGRP2Q7LDG7 609 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 CNNM3Q8NE01 707 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 TMEM174Q8WUU8 243 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 PARK7Q99497 189 aaKnown RBP8.08□□□□□ -1.12
NUP43-201ENST00000340413 RNF146Q9NTX7 359 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 KCNG1Q9UIX4 513 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 UBE4BO95155 1302 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 UBA7P41226 1012 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 TYRO3Q06418 890 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 IL17AQ16552 155 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 CABP7Q86V35 215 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 SMC1BQ8NDV3 1235 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 SLC17A8Q8NDX2 589 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 CCDC102AQ96A19 550 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 FTOQ9C0B1 505 aaKnown RBP eCLIP8.08□□□□□ -1.12
NUP43-201ENST00000340413 PXMP2Q9NR77 195 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 ARID2Q68CP9 1835 aa8.08□□□□□ -1.12
NUP43-201ENST00000340413 FAM205CA6NFA0 338 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 CNMDO75829 334 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 PSMD10O75832 226 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 TGFB3P10600 412 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 RPA1P27694 616 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 CDC25BP30305 580 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 TPM4P67936 248 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 IRX3P78415 501 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 SPIRE1Q08AE8 756 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 DPYDQ12882 1025 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 MORC3Q14149 939 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 TMEM132BQ14DG7 1078 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 EPHA7Q15375 998 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 HS1BP3Q53T59 392 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 SMAP1Q8IYB5 467 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 NOC3LQ8WTT2 800 aaKnown RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 HAS1Q92839 578 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 ATG4CQ96DT6 458 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 MS4A4AQ96JQ5 239 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 ELP3Q9H9T3 547 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 GRPEL1Q9HAV7 217 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 TMEM260Q9NX78 707 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 NRBP1Q9UHY1 535 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 VAV3Q9UKW4 847 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 TLL2Q9Y6L7 1015 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 PLXNA1Q9UIW2 1896 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 HERVK_113P62684 666 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 KRT76Q01546 638 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 RRAGBQ5VZM2 374 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 ZNF746Q6NUN9 644 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 SPICE1Q8N0Z3 855 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 INPP4AQ96PE3 977 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 TEKT3Q9BXF9 490 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 SPATC1LQ9H0A9 340 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 TMEM60Q9H2L4 133 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 CPVLQ9H3G5 476 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 LRWD1Q9UFC0 647 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 DNAJC25-GNG10A0A024R161 153 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 MAPTP10636 758 aaKnown RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 MARCKSP29966 332 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 HSP90AA2PQ14568 343 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 PGM5Q15124 567 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 UBE2SQ16763 222 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 VSIG10LQ86VR7 867 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 SDF4Q9BRK5 362 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 ASCC2Q9H1I8 757 aaPredicted RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 CYP39A1Q9NYL5 469 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 DBR1Q9UK59 544 aaKnown RBP8.07□□□□□ -1.12
NUP43-201ENST00000340413 PCDHA12Q9UN75 941 aa8.07□□□□□ -1.12
NUP43-201ENST00000340413 A0A1B0GVL5 298 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 VWA3AA6NCI4 1184 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 KIF20AO95235 890 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 SLC10A3P09131 477 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 SLURP2P0DP57 97 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 SREBF2Q12772 1141 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 ZRSR1Q15695 479 aaKnown RBP8.06□□□□□ -1.12
NUP43-201ENST00000340413 GNPTABQ3T906 1256 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 SNRNP48Q6IEG0 339 aaKnown RBP8.06□□□□□ -1.12
NUP43-201ENST00000340413 POTEDQ86YR6 584 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 SMARCE1Q969G3 411 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 PAGE5Q96GU1 130 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 PDCD2LQ9BRP1 358 aa8.06□□□□□ -1.12
NUP43-201ENST00000340413 RRAGCQ9HB90 399 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms