RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 HOMEZQ8IX15 550 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 ARHGEF1Q92888 912 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 NUDCD1Q96RS6 583 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 EDEM3Q9BZQ6 932 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 CNOT10Q9H9A5 744 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 PLS3P13797 630 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 POLR2BP30876 1174 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 ZNF654Q8IZM8 581 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 ANGEL1Q9UNK9 670 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 SOX5P35711 763 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 PIK3CAP42336 1068 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 ARHGEF6Q15052 776 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 CCDC142Q17RM4 750 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 RPN1P04843 607 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 MLH1P40692 756 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 FAM102BQ5T8I3 360 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 STX19Q8N4C7 294 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 LLPHQ9BRT6 129 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 LRWD1Q9UFC0 647 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 GRK2P25098 689 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 VCPP55072 806 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 DYNLT1P63172 113 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 WASHC5Q12768 1159 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 THAP11Q96EK4 314 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 FMO2Q99518 471 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 ELAC2Q9BQ52 826 aaKnown RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 TMEM245Q9H330 911 aa13.87□□□□□ -0.19
USP47-202ENST00000339865 EPN1Q9Y6I3 576 aaPredicted RBP13.87□□□□□ -0.19
USP47-202ENST00000339865 ANP32DO95626 131 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 GUCY1A3Q02108 690 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 Q3C1V9 767 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 OLFML2BQ68BL8 750 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 AHI1Q8N157 1196 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 ADA2Q9NZK5 511 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 RHOBTB1O94844 696 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 NR1D1P20393 614 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 BASP1P80723 227 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 DMC1Q14565 340 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 CAPRIN2Q6IMN6 1127 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 CPXCR1Q8N123 301 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 SYT2Q8N9I0 419 aaPredicted RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 GADL1Q6ZQY3 521 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 OSBPL1AQ9BXW6 950 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 ZC3H15Q8WU90 426 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 DONSONQ9NYP3 566 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 PPARGC1AQ9UBK2 798 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 CPSF3Q9UKF6 684 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 hCG_1642624A0A1W2PR95 340 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 TYW5A2RUC4 315 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 DTNBO60941 627 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 AARSP49588 968 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP47-202ENST00000339865 EPHB4P54760 987 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 TBL3Q12788 808 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 MORF4L2Q15014 288 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 ALS2CLQ60I27 953 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 CDR2LQ86X02 465 aaPredicted RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 SEC24DO94855 1032 aaPredicted RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 C8orf34Q49A92 452 aa13.86□□□□□ -0.19
USP47-202ENST00000339865 NSFL1CQ9UNZ2 370 aaKnown RBP13.86□□□□□ -0.19
USP47-202ENST00000339865 NNTQ13423 1086 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 TTC25Q96NG3 672 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 SUN2Q9UH99 717 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 CNGA3Q16281 694 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 EIF3CQ99613 913 aaKnown RBP13.85□□□□□ -0.19
USP47-202ENST00000339865 MRPS26Q9BYN8 205 aaKnown RBP13.85□□□□□ -0.19
USP47-202ENST00000339865 PITPNM3Q9BZ71 974 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 MYO1FO00160 1098 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 CHUKO15111 745 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 LIG4P49917 911 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 XAGE3Q8WTP9 111 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 HESX1Q9UBX0 185 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 KIF1CO43896 1103 aaKnown RBP13.85□□□□□ -0.19
USP47-202ENST00000339865 AFPP02771 609 aaKnown RBP13.85□□□□□ -0.19
USP47-202ENST00000339865 KPNA2P52292 529 aaKnown RBP13.85□□□□□ -0.19
USP47-202ENST00000339865 ETF1P62495 437 aaKnown RBP13.85□□□□□ -0.19
USP47-202ENST00000339865 FRA10AC1Q70Z53 315 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 CDC37L1Q7L3B6 337 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 ABI1Q8IZP0 508 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 NIP7Q9Y221 180 aaKnown RBP eCLIP13.85□□□□□ -0.19
USP47-202ENST00000339865 GOLGA8FQ08AF8 430 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 GOLGA8DPQ0D2H9 430 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 ANO5Q75V66 913 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 ANKRD13CQ8N6S4 541 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 SESN1Q9Y6P5 492 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 RASSF10A6NK89 507 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 S100A5P33763 92 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 COPS6Q7L5N1 327 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 TTC41PQ6P2S7 1318 aa13.85□□□□□ -0.19
USP47-202ENST00000339865 ACSL3O95573 720 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 OLFM3Q96PB7 478 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 FOSL2P15408 326 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 ACTN3Q08043 901 aaPredicted RBP13.84□□□□□ -0.19
USP47-202ENST00000339865 MMS22LQ6ZRQ5 1243 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 ARMCX3Q9UH62 379 aaPredicted RBP13.84□□□□□ -0.19
USP47-202ENST00000339865 NOVA2Q9UNW9 492 aaKnown RBP13.84□□□□□ -0.19
USP47-202ENST00000339865 MAP4P27816 1152 aaKnown RBP13.84□□□□□ -0.19
USP47-202ENST00000339865 PLD3Q8IV08 490 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 SLC35F6Q8N357 371 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 DEPTORQ8TB45 409 aa13.84□□□□□ -0.19
USP47-202ENST00000339865 ADNPQ9H2P0 1102 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms