RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 PDE6AP16499 860 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 RCAN1P53805 252 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 AGBL2Q5U5Z8 902 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 MIS18BP1Q6P0N0 1132 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 NBPF10Q6P3W6 841 aaKnown RBP10.37□□□□□ -0.75
NECAP1-201ENST00000339754 MFSD6Q6ZSS7 791 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 TMTC2Q8N394 836 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 RNF10Q8N5U6 811 aaKnown RBP10.37□□□□□ -0.75
NECAP1-201ENST00000339754 NBPF15Q8N660 670 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 CSGALNACT2Q8N6G5 542 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 MICAL1Q8TDZ2 1067 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 SAAL1Q96ER3 474 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 SPAG5Q96R06 1193 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 ISCUQ9H1K1 167 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 NDST4Q9H3R1 872 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 KCNMB3Q9NPA1 279 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 FBXO3Q9UK99 471 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 SLC12A4Q9UP95 1085 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 L3MBTL1Q9Y468 752 aa10.37□□□□□ -0.75
NECAP1-201ENST00000339754 SCN11AQ9UI33 1791 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 GRID2IPA4D2P6 1211 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 DCDC2CA8MYV0 355 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 PSMA7O14818 248 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 AKR1B10O60218 316 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 ZPR1O75312 459 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 SMNDC1O75940 238 aaKnown RBP eCLIP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 RHOBTB3O94955 611 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 XBP1P17861 261 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 ERVK-9P63128 1117 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 RASSF7Q02833 373 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CCDC57Q2TAC2 916 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 GRIPAP1Q4V328 841 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 NAALADL2Q58DX5 795 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 RRP12Q5JTH9 1297 aaKnown RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 ANKRD40Q6AI12 368 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CHADLQ6NUI6 762 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CPLX4Q7Z7G2 160 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 IFNL2Q8IZJ0 200 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CCDC47Q96A33 483 aaKnown RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 DHTKD1Q96HY7 919 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 ZNF570Q96NI8 536 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 INPP4AQ96PE3 977 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 NOX5Q96PH1 765 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 NOVA2Q9UNW9 492 aaKnown RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CHD4Q14839 1912 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 BHMG1C9JSJ3 638 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CYP27B1O15528 508 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CAPRIN2Q6IMN6 1127 aaKnown RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 RUFY4Q6ZNE9 571 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CCDC26Q8TAB7 109 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 TCP11Q8WWU5 503 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 CNOT6LQ96LI5 555 aaKnown RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 NOC4LQ9BVI4 516 aaKnown RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 NAPBQ9H115 298 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 HOMER3Q9NSC5 361 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 PANK4Q9NVE7 773 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 TMEM59LQ9UK28 342 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 SIK3Q9Y2K2 1263 aa10.36□□□□□ -0.75
NECAP1-201ENST00000339754 V9GY48 417 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-201ENST00000339754 PRPF3O43395 683 aaKnown RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 GSTA1P08263 222 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ZNF268Q14587 947 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ODF2Q5BJF6 829 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 AP1ARQ63HQ0 302 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 TOM1L2Q6ZVM7 507 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 C4orf32Q8N8J7 132 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 CCDC63Q8NA47 563 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 PARD3BQ8TEW8 1205 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ZNF512BQ96KM6 892 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 MTA3Q9BTC8 594 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 GSG1L2A8MUP6 293 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 CLTAP09496 248 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ALADP13716 330 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 CTNNA1P35221 906 aaKnown RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 PEX19P40855 299 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 STAT6P42226 847 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 SLC1A4P43007 532 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 MTIF2P46199 727 aaKnown RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 GFPT1Q06210 699 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ERMARDQ5T6L9 678 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 CCHCR1Q8TD31 782 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 AGAP11Q8TF27 550 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 IQCDQ96DY2 449 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 ZNF317Q96PQ6 595 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 NEUROG2Q9H2A3 272 aa10.35□□□□□ -0.75
NECAP1-201ENST00000339754 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 CORO1CQ9ULV4 474 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-201ENST00000339754 MYH2Q9UKX2 1941 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 ERICH2A1L162 156 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 PALMO75781 387 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 CCNE1P24864 410 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 CDC25CP30307 473 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 MCM7P33993 719 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 FLT3P36888 993 aa10.34□□□□□ -0.75
NECAP1-201ENST00000339754 RNASE9P60153 205 aaKnown RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 MAGOHP61326 146 aaKnown RBP10.34□□□□□ -0.75
NECAP1-201ENST00000339754 SLMAPQ14BN4 828 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms