RNA–Protein interactions for RNA: ENST00000339438.10

CSDE1-202, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-202ENST00000339438 FBXL16Q8N461 479 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 NSMCE1Q8WV22 266 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 TCP11Q8WWU5 503 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CAVIN3Q969G5 261 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 NCOA5Q9HCD5 579 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CD209Q9NNX6 404 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF277Q9NRM2 450 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ADD3Q9UEY8 706 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 DMGDHQ9UI17 866 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 DBNLQ9UJU6 430 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 C15orf41Q9Y2V0 281 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PCDHA5Q9Y5H7 936 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 KIAA1549LQ6ZVL6 1849 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ERICH2A1L162 156 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 A6NNZ2 444 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 LIN7AO14910 233 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PPP1R37O75864 691 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 TNFRSF8P28908 595 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 SCTRP47872 440 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 MORC3Q14149 939 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 TUBB8Q3ZCM7 444 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 SLC9C2Q5TAH2 1124 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CDKAL1Q5VV42 579 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CWF19L1Q69YN2 538 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CRELD2Q6UXH1 353 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 KIF6Q6ZMV9 814 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 NCAPG2Q86XI2 1143 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CEP57Q86XR8 500 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 SAAL1Q96ER3 474 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ZIM3Q96PE6 472 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 MMTAG2Q9BU76 263 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 TTF2Q9UNY4 1162 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ECE2O60344 883 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 KRT14P02533 472 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PDIA3P30101 505 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CDC25CP30307 473 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PPP4CP60510 307 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 GUCY1B3Q02153 619 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 SLC39A14Q15043 492 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 SPDYE2Q495Y8 402 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF662Q6ZS27 426 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PDILTQ8N807 584 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CYFIP2Q96F07 1278 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 GPR101Q96P66 508 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PURBQ96QR8 312 aaKnown RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 LRRC2Q9BYS8 371 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ACTR5Q9H9F9 607 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 NOD2Q9HC29 1040 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 GJB4Q9NTQ9 266 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 SLC12A6Q9UHW9 1150 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 DENND4AQ7Z401 1863 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ITIH6Q6UXX5 1313 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ENC1O14682 589 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 ZNF185O15231 689 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CASP14P31944 242 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 IFT88Q13099 833 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 RIPK1Q13546 671 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 BLMHQ13867 455 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 PDCD2Q16342 344 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 OTUD7BQ6GQQ9 843 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CHADLQ6NUI6 762 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 MTHFD1LQ6UB35 978 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 DNAJC14Q6Y2X3 702 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CREG2Q8IUH2 290 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CCDC50Q8IVM0 306 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 CD302Q8IX05 232 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 EPAS1Q99814 870 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 NDST4Q9H3R1 872 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 MAN1B1Q9UKM7 699 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 NFE2L3Q9Y4A8 694 aa6.22□□□□□ -1.41
CSDE1-202ENST00000339438 GPR75-ASB3A0A0A6YYF3 556 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 A0A1B0GVG6 124 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ZSCAN9O15535 394 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 TBC1D12O60347 775 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 PYGBP11216 843 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 CCNG1P51959 295 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 FOSBP53539 338 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 HERVK_113P62684 666 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 AKAP17AQ02040 695 aaKnown RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 NAA25Q14CX7 972 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 FILIP1LQ4L180 1135 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 DLK2Q6UY11 383 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 MMGT1Q8N4V1 131 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 EAF2Q96CJ1 260 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 MXD3Q9BW11 206 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 COA1Q9GZY4 146 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 CCDC8Q9H0W5 538 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.21□□□□□ -1.427e-7■□□□□ 9.9
CSDE1-202ENST00000339438 TFR2Q9UP52 801 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ASB3Q9Y575 518 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 NDUFB9Q9Y6M9 179 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 SPENQ96T58 3664 aaKnown RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ANK1P16157 1881 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 RCCD1A6NED2 376 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 IBSPP21815 317 aaPredicted RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 MCM3P25205 808 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 ADORA1P30542 326 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 SLC8A1P32418 973 aa6.21□□□□□ -1.42
CSDE1-202ENST00000339438 MDH1P40925 334 aaKnown RBP6.21□□□□□ -1.42
CSDE1-202ENST00000339438 EPS15P42566 896 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms