RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 GAS2L1Q99501 681 aaPredicted RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 SLC28A3Q9HAS3 691 aa12.4□□□□□ -0.42
CAPN3-202ENST00000337571 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
CAPN3-202ENST00000337571 UMODL1Q5DID0 1318 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 CDH23Q9H251 3354 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 IFIT3O14879 490 aaKnown RBP12.39□□□□□ -0.43
CAPN3-202ENST00000337571 ACTN1P12814 892 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 PBX2P40425 430 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 BFSP2Q13515 415 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 DEFB128Q7Z7B8 93 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 SCLYQ96I15 445 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 WNT8AQ9H1J5 351 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
CAPN3-202ENST00000337571 ZBTB5O15062 677 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 NR3C2P08235 984 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 EIF2AK2P19525 551 aaKnown RBP12.38□□□□□ -0.43
CAPN3-202ENST00000337571 CHMLP26374 656 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 PDE4AP27815 886 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 RFC2P35250 354 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 LAMC2Q13753 1193 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 WTAPQ15007 396 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 SEC23AQ15436 765 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 PTGISQ16647 500 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 KCNV1Q6PIU1 500 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 SAMD3Q8N6K7 520 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 NCOA7Q8NI08 942 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN3-202ENST00000337571 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 CXXC1Q9P0U4 656 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-202ENST00000337571 TRPC6Q9Y210 931 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 KIAA1217Q5T5P2 1943 aa12.38□□□□□ -0.43
CAPN3-202ENST00000337571 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-202ENST00000337571 ARIH2O95376 493 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 CYP21A2P08686 494 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-202ENST00000337571 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
CAPN3-202ENST00000337571 DGKDQ16760 1214 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
CAPN3-202ENST00000337571 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-202ENST00000337571 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 COL20A1Q9P218 1284 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
CAPN3-202ENST00000337571 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
CAPN3-202ENST00000337571 E7EWF7 191 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-202ENST00000337571 MMP3P08254 477 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
CAPN3-202ENST00000337571 IGFBP4P22692 258 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 HSD17B4P51659 736 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 IRX6P78412 446 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-202ENST00000337571 PTH1RQ03431 593 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
CAPN3-202ENST00000337571 KATNAL1Q9BW62 490 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 IL25Q9H293 177 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 MYH7BA7E2Y1 1941 aa12.36□□□□□ -0.43
CAPN3-202ENST00000337571 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 PNMA6FA0A0J9YX94 578 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-202ENST00000337571 RABGGTBP53611 331 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 GRM4Q14833 912 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 TMEM67Q5HYA8 995 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-202ENST00000337571 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 PIGSQ96S52 555 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 GBF1Q92538 1859 aa12.35□□□□□ -0.43
CAPN3-202ENST00000337571 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 SGSM2O43147 1006 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
CAPN3-202ENST00000337571 TGFB3P10600 412 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 CCND2P30279 289 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 VSIG10LQ86VR7 867 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 CTCFLQ8NI51 663 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-202ENST00000337571 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 PHOSPHO2Q8TCD6 241 aa12.34□□□□□ -0.43
CAPN3-202ENST00000337571 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms