RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 TTYH3Q9C0H2 523 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 BCAS3Q9H6U6 928 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 JADE2Q9NQC1 790 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 KIAA1024Q9UPX6 916 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 POTEB3A0JP26 581 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 POTECB2RU33 542 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 CXCR5P32302 372 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 MATR3P43243 847 aaKnown RBP eCLIP16.52■□□□□ 0.242e-7■■■□□ 17.3
UBA1-201ENST00000335972 AMPD2Q01433 879 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 ASPRV1Q53RT3 343 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 POTEBQ6S5H4 581 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 PROM2Q8N271 834 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 PLEKHA4Q9H4M7 779 aa16.52■□□□□ 0.24
UBA1-201ENST00000335972 CCDC42Q96M95 316 aa16.52■□□□□ 0.23
UBA1-201ENST00000335972 NDST4Q9H3R1 872 aa16.52■□□□□ 0.23
UBA1-201ENST00000335972 DNAJC18Q9H819 358 aa16.52■□□□□ 0.23
UBA1-201ENST00000335972 EHD2Q9NZN4 543 aa16.52■□□□□ 0.23
UBA1-201ENST00000335972 TAF1LQ8IZX4 1826 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 PNMA6FA0A0J9YX94 578 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 DDTLA6NHG4 134 aaPredicted RBP16.51■□□□□ 0.23
UBA1-201ENST00000335972 APOBEC3HQ6NTF7 200 aaKnown RBP16.51■□□□□ 0.23
UBA1-201ENST00000335972 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 IPO7O95373 1038 aaKnown RBP16.51■□□□□ 0.23
UBA1-201ENST00000335972 CUEDC2Q9H467 287 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 DEF6Q9H4E7 631 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 TRAF5O00463 557 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 EIF4A3P38919 411 aaKnown RBP16.51■□□□□ 0.23
UBA1-201ENST00000335972 ZBED6P86452 979 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 QRICH1Q2TAL8 776 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 VWA3BQ502W6 1294 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 BEND6Q5SZJ8 279 aaPredicted RBP16.51■□□□□ 0.23
UBA1-201ENST00000335972 UNC13DQ70J99 1090 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 SPICE1Q8N0Z3 855 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 PCDHA12Q9UN75 941 aa16.51■□□□□ 0.23
UBA1-201ENST00000335972 PDE2AO00408 941 aaPredicted RBP16.5■□□□□ 0.23
UBA1-201ENST00000335972 MOCS3O95396 460 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 MYL1P05976 194 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 EEF2P13639 858 aaKnown RBP16.5■□□□□ 0.23
UBA1-201ENST00000335972 SEPT2Q15019 361 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 CUL5Q93034 780 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 ARHGAP20Q9P2F6 1191 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 ATP6V0A2Q9Y487 856 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 PCDHA1Q9Y5I3 950 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 LRRC53A6NM62 1247 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
UBA1-201ENST00000335972 CYLC1P35663 651 aaPredicted RBP16.5■□□□□ 0.23
UBA1-201ENST00000335972 SLC1A4P43007 532 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 CENPPQ6IPU0 288 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 DNAAF5Q86Y56 855 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 P2RX7Q99572 595 aaKnown RBP16.5■□□□□ 0.23
UBA1-201ENST00000335972 COA1Q9GZY4 146 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 HAUS4Q9H6D7 363 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 ADAMTSL1Q8N6G6 1762 aa16.5■□□□□ 0.23
UBA1-201ENST00000335972 CCDC151A5D8V7 595 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 NCK2O43639 380 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 ADRA2BP18089 450 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 C2orf54Q08AI8 447 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 SP8Q8IXZ3 490 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 RIC8AQ9NPQ8 531 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 SAR1BQ9Y6B6 198 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 CAPN6Q9Y6Q1 641 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 IGKV6D-41A0A0C4DH26 115 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 POTEFA5A3E0 1075 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 POTEIP0CG38 1075 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 COASYQ13057 564 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 POTEGQ6S5H5 508 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 POTEEQ6S8J3 1075 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 FAM114A1Q8IWE2 563 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 TEKT1Q969V4 418 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 CRAMP1Q96RY5 1269 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 QTRT2Q9H974 415 aaKnown RBP16.49■□□□□ 0.23
UBA1-201ENST00000335972 AKR1B10O60218 316 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 KIF20AO95235 890 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 HOXA13P31271 388 aaPredicted RBP16.49■□□□□ 0.23
UBA1-201ENST00000335972 TNNT3P45378 269 aaPredicted RBP16.49■□□□□ 0.23
UBA1-201ENST00000335972 CRKP46108 304 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 FXR2P51116 673 aaKnown RBP eCLIP16.49■□□□□ 0.236e-7■■■□□ 18.7
UBA1-201ENST00000335972 PTPROQ16827 1216 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 CCDC40Q4G0X9 1142 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 TRAPPC11Q7Z392 1133 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 NOC3LQ8WTT2 800 aaKnown RBP16.49■□□□□ 0.23
UBA1-201ENST00000335972 PANK4Q9NVE7 773 aa16.49■□□□□ 0.23
UBA1-201ENST00000335972 ZBTB5O15062 677 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 BUB1O43683 1085 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 GFPT1Q06210 699 aaPredicted RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 WHAMMP3Q1A5X7 153 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 VPS18Q9P253 973 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 NHSQ6T4R5 1651 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 ESYT2A0FGR8 921 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 TULP1O00294 542 aaPredicted RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 KRT86O43790 486 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 KRT18P05783 430 aaKnown RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 HLA-DOAP06340 250 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 SNHG28P0DPA3 235 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 NAP1L1P55209 391 aaKnown RBP16.48■□□□□ 0.23
UBA1-201ENST00000335972 KRT83P78385 493 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 CYP4A11Q02928 519 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 MEA1Q16626 185 aa16.48■□□□□ 0.23
UBA1-201ENST00000335972 PRR16Q569H4 304 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms