RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SCRN1Q12765 414 aa21.13■□□□□ 0.97
HLA-F-217ENST00000334668 RNF180Q86T96 592 aa21.13■□□□□ 0.97
HLA-F-217ENST00000334668 IL31RAQ8NI17 732 aa21.13■□□□□ 0.97
HLA-F-217ENST00000334668 WDR11Q9BZH6 1224 aa21.13■□□□□ 0.97
HLA-F-217ENST00000334668 RIC8AQ9NPQ8 531 aa21.13■□□□□ 0.97
HLA-F-217ENST00000334668 MYH7BA7E2Y1 1941 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 STK3Q13188 491 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 TMEM63BQ5T3F8 832 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 CCDC62Q6P9F0 684 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 SMARCC2Q8TAQ2 1214 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 SCFD2Q8WU76 684 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 TSEN34Q9BSV6 310 aaKnown RBP21.12■□□□□ 0.97
HLA-F-217ENST00000334668 SLC26A6Q9BXS9 759 aa21.12■□□□□ 0.97
HLA-F-217ENST00000334668 SLKQ9H2G2 1235 aaPredicted RBP21.12■□□□□ 0.97
HLA-F-217ENST00000334668 ESYT2A0FGR8 921 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 KBTBD13C9JR72 458 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 CPLX1O14810 134 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 RGS20O76081 388 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 AKAP17AQ02040 695 aaKnown RBP21.11■□□□□ 0.97
HLA-F-217ENST00000334668 ME3Q16798 604 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 HTATIP2Q9BUP3 242 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 GLT8D2Q9H1C3 349 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 PHF24Q9UPV7 400 aa21.11■□□□□ 0.97
HLA-F-217ENST00000334668 MYADML2A6NDP7 307 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 SMCO2A6NFE2 343 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 NKRFO15226 690 aaKnown RBP eCLIP21.1■□□□□ 0.97
HLA-F-217ENST00000334668 CCND2P30279 289 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 CLK2P49760 499 aaKnown RBP21.1■□□□□ 0.97
HLA-F-217ENST00000334668 SSRP1Q08945 709 aaKnown RBP21.1■□□□□ 0.97
HLA-F-217ENST00000334668 UBE2SQ16763 222 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 CPLX2Q6PUV4 134 aaKnown RBP21.1■□□□□ 0.97
HLA-F-217ENST00000334668 TLK2Q86UE8 772 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 TBC1D32Q96NH3 1257 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 BACH2Q9BYV9 841 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 ZMYND12Q9H0C1 365 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 UPF2Q9HAU5 1272 aaKnown RBP21.1■□□□□ 0.97
HLA-F-217ENST00000334668 SPC25Q9HBM1 224 aa21.1■□□□□ 0.97
HLA-F-217ENST00000334668 PPFIA3O75145 1194 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 ARIH2O95376 493 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 LARGE1O95461 756 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 PTGS1P23219 599 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 ADCY7P51828 1080 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 IRX5P78411 483 aaPredicted RBP21.09■□□□□ 0.97
HLA-F-217ENST00000334668 MRPS9P82933 396 aaKnown RBP21.09■□□□□ 0.97
HLA-F-217ENST00000334668 TTLL4Q14679 1199 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 PCNX4Q63HM2 1172 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 XRRA1Q6P2D8 792 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 TRIM22Q8IYM9 498 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 SH3GLB2Q9NR46 395 aa21.09■□□□□ 0.97
HLA-F-217ENST00000334668 MOXD2PA6NHM9 499 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 DYNC1LI2O43237 492 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 STAM2O75886 525 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 CDKL5O76039 1030 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 DEXIO95424 95 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 CTDNEP1O95476 244 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 C6orf222P0C671 652 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 MYCLP12524 364 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 KCNA10Q16322 511 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 SEPT14Q6ZU15 432 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 NOL8Q76FK4 1167 aaKnown RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 FAM177A1Q8N128 213 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 IL27Q8NEV9 243 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 CCDC12Q8WUD4 166 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 GTF3C6Q969F1 213 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 SENP6Q9GZR1 1112 aaPredicted RBP21.08■□□□□ 0.97
HLA-F-217ENST00000334668 PCDHA6Q9UN73 950 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 PCDHA8Q9Y5H6 950 aa21.08■□□□□ 0.97
HLA-F-217ENST00000334668 STK36Q9NRP7 1315 aa21.07■□□□□ 0.96
HLA-F-217ENST00000334668 FOSP01100 380 aaPredicted RBP21.07■□□□□ 0.96
HLA-F-217ENST00000334668 TXNP10599 105 aaKnown RBP21.07■□□□□ 0.96
HLA-F-217ENST00000334668 RABEP1Q15276 862 aa21.07■□□□□ 0.96
HLA-F-217ENST00000334668 GNASQ5JWF2 1037 aa21.07■□□□□ 0.96
HLA-F-217ENST00000334668 PCSK9Q8NBP7 692 aaKnown RBP21.07■□□□□ 0.96
HLA-F-217ENST00000334668 INPP4AQ96PE3 977 aaPredicted RBP21.07■□□□□ 0.96
HLA-F-217ENST00000334668 AP5M1Q9H0R1 490 aa21.07■□□□□ 0.96
HLA-F-217ENST00000334668 DDX41Q9UJV9 622 aaKnown RBP21.07■□□□□ 0.96
HLA-F-217ENST00000334668 LIMCH1Q9UPQ0 1083 aa21.07■□□□□ 0.96
HLA-F-217ENST00000334668 SPDYE3A6NKU9 549 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 TGFB3P10600 412 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 ACLYP53396 1101 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 AP3B2Q13367 1082 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 SNX17Q15036 470 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 FSCN1Q16658 493 aaKnown RBP21.06■□□□□ 0.96
HLA-F-217ENST00000334668 C1orf53Q5VUE5 145 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 KCNV1Q6PIU1 500 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 NECAB1Q8N987 351 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 COPS5Q92905 334 aa21.06■□□□□ 0.96
HLA-F-217ENST00000334668 SCN10AQ9Y5Y9 1956 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 A0A1W2PQ45 241 aaPredicted RBP21.05■□□□□ 0.96
HLA-F-217ENST00000334668 A0A1W2PQY0 241 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 GNA11P29992 359 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 ICAM3P32942 547 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 BEX3Q00994 111 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 ST3GAL1Q11201 340 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 LY6KQ17RY6 165 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 LRRC26Q2I0M4 334 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 SLC39A5Q6ZMH5 540 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 CCDC148Q8NFR7 591 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 MS4A3Q96HJ5 214 aa21.05■□□□□ 0.96
HLA-F-217ENST00000334668 C6orf50Q9HD87 102 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms