RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.47■■□□□ 1.35
MRPL40-201ENST00000333130 PCDHA8Q9Y5H6 950 aa23.47■■□□□ 1.35
MRPL40-201ENST00000333130 DDX49Q9Y6V7 483 aaKnown RBP23.47■■□□□ 1.35
MRPL40-201ENST00000333130 TRIM29Q14134 588 aa23.46■■□□□ 1.35
MRPL40-201ENST00000333130 ANO1Q5XXA6 986 aa23.46■■□□□ 1.35
MRPL40-201ENST00000333130 RNF180Q86T96 592 aa23.46■■□□□ 1.35
MRPL40-201ENST00000333130 ALG1Q9BT22 464 aa23.46■■□□□ 1.35
MRPL40-201ENST00000333130 KIF3AQ9Y496 699 aa23.46■■□□□ 1.35
MRPL40-201ENST00000333130 KBTBD13C9JR72 458 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 NKRFO15226 690 aaKnown RBP eCLIP23.45■■□□□ 1.34
MRPL40-201ENST00000333130 ADCYAP1R1P41586 468 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 PCNX4Q63HM2 1172 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 TAPT1Q6NXT6 567 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 KCNV1Q6PIU1 500 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 SEPT14Q6ZU15 432 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 VSIG10LQ86VR7 867 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 WDR11Q9BZH6 1224 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 BRMS1Q9HCU9 246 aa23.45■■□□□ 1.34
MRPL40-201ENST00000333130 FARP2O94887 1054 aaPredicted RBP23.44■■□□□ 1.34
MRPL40-201ENST00000333130 MYCNP04198 464 aaPredicted RBP23.44■■□□□ 1.34
MRPL40-201ENST00000333130 NPY5RQ15761 445 aa23.44■■□□□ 1.34
MRPL40-201ENST00000333130 FAM184AQ8NB25 1140 aa23.44■■□□□ 1.34
MRPL40-201ENST00000333130 PHF20Q9BVI0 1012 aa23.44■■□□□ 1.34
MRPL40-201ENST00000333130 ANO3Q9BYT9 981 aa23.44■■□□□ 1.34
MRPL40-201ENST00000333130 AP5M1Q9H0R1 490 aa23.44■■□□□ 1.34
MRPL40-201ENST00000333130 PCDHA4Q9UN74 947 aa23.44■■□□□ 1.34
MRPL40-201ENST00000333130 RBM47A0AV96 593 aaKnown RBP23.43■■□□□ 1.34
MRPL40-201ENST00000333130 CLK2P49760 499 aaKnown RBP23.43■■□□□ 1.34
MRPL40-201ENST00000333130 IFFO2Q5TF58 517 aa23.43■■□□□ 1.34
MRPL40-201ENST00000333130 TLK2Q86UE8 772 aa23.43■■□□□ 1.34
MRPL40-201ENST00000333130 PDGFCQ9NRA1 345 aa23.43■■□□□ 1.34
MRPL40-201ENST00000333130 Q9Y3F1 56 aa23.43■■□□□ 1.34
MRPL40-201ENST00000333130 MRVI1Q9Y6F6 885 aa23.43■■□□□ 1.34
MRPL40-201ENST00000333130 MYH7BA7E2Y1 1941 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 DNM1LO00429 736 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 TXNP10599 105 aaKnown RBP23.42■■□□□ 1.34
MRPL40-201ENST00000333130 GJB2P29033 226 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 DUSP28Q4G0W2 176 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 JAKMIP3Q5VZ66 844 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 NLRX1Q86UT6 975 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 DAGLBQ8NCG7 672 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 IL31RAQ8NI17 732 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 SMC3Q9UQE7 1217 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 SYNRGQ9UMZ2 1314 aa23.42■■□□□ 1.34
MRPL40-201ENST00000333130 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.41■■□□□ 1.34
MRPL40-201ENST00000333130 C6orf222P0C671 652 aaPredicted RBP23.41■■□□□ 1.34
MRPL40-201ENST00000333130 SMPD1P17405 629 aa23.41■■□□□ 1.34
MRPL40-201ENST00000333130 BRDTQ58F21 947 aaPredicted RBP23.41■■□□□ 1.34
MRPL40-201ENST00000333130 BLIDQ8IZY5 108 aa23.41■■□□□ 1.34
MRPL40-201ENST00000333130 LENG1Q96BZ8 264 aaPredicted RBP23.41■■□□□ 1.34
MRPL40-201ENST00000333130 CDHR1Q96JP9 859 aa23.41■■□□□ 1.34
MRPL40-201ENST00000333130 GJB4Q9NTQ9 266 aa23.41■■□□□ 1.34
MRPL40-201ENST00000333130 M0R2N6 131 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 ADAMTS3O15072 1205 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 PGK1P00558 417 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 TGFB3P10600 412 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 SREBF1P36956 1147 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 NECAB2Q7Z6G3 386 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 TMEM260Q9NX78 707 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 FIBPO43427 364 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 ZEB2O60315 1214 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 ZNF76P36508 570 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 GJA9P57773 515 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 LRRC41Q15345 812 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 PCSK9Q8NBP7 692 aaKnown RBP23.4■■□□□ 1.34
MRPL40-201ENST00000333130 OR6J1Q8NGC5 347 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 PGBD1Q96JS3 809 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 INPP4AQ96PE3 977 aaPredicted RBP23.4■■□□□ 1.34
MRPL40-201ENST00000333130 UPF3AQ9H1J1 476 aaKnown RBP23.4■■□□□ 1.34
MRPL40-201ENST00000333130 KCNJ14Q9UNX9 436 aa23.4■■□□□ 1.34
MRPL40-201ENST00000333130 GNEQ9Y223 722 aaKnown RBP23.4■■□□□ 1.34
MRPL40-201ENST00000333130 DYNC1LI2O43237 492 aaPredicted RBP23.39■■□□□ 1.33
MRPL40-201ENST00000333130 ADCY6O43306 1168 aa23.39■■□□□ 1.33
MRPL40-201ENST00000333130 CPT1AP50416 773 aa23.39■■□□□ 1.33
MRPL40-201ENST00000333130 MRPS9P82933 396 aaKnown RBP23.39■■□□□ 1.33
MRPL40-201ENST00000333130 SAFBQ15424 915 aaKnown RBP eCLIP23.39■■□□□ 1.33
MRPL40-201ENST00000333130 GJC2Q5T442 439 aaPredicted RBP23.39■■□□□ 1.33
MRPL40-201ENST00000333130 C8orf76Q96K31 380 aa23.39■■□□□ 1.33
MRPL40-201ENST00000333130 ADAMTS4O75173 837 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 GH1P01241 217 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 MMP1P03956 469 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 CST5P28325 142 aaPredicted RBP23.38■■□□□ 1.33
MRPL40-201ENST00000333130 ARHGAP4P98171 946 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 BECN1Q14457 450 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 KRT40Q6A162 431 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 KRT25Q7Z3Z0 450 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 FBXO18Q8NFZ0 1043 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 RASGRP4Q8TDF6 673 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 GPRASP2Q96D09 838 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 PAWRQ96IZ0 340 aaKnown RBP23.38■■□□□ 1.33
MRPL40-201ENST00000333130 TSEN34Q9BSV6 310 aaKnown RBP23.38■■□□□ 1.33
MRPL40-201ENST00000333130 C11orf49Q9H6J7 331 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 RTEL1Q9NZ71 1219 aa23.38■■□□□ 1.33
MRPL40-201ENST00000333130 CCDC194A0A1B0GVG4 234 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 MAFGO15525 162 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 ICAM3P32942 547 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 KRT2P35908 639 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 RGS19P49795 217 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 MTMR1Q13613 665 aa23.37■■□□□ 1.33
MRPL40-201ENST00000333130 FSCN1Q16658 493 aaKnown RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms