RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 MIIPQ5JXC2 388 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 TLR10Q9BXR5 811 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 TMEM94Q12767 1356 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 PKD1L3Q7Z443 1732 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 GOLGA6L7A0A1B0GV03 622 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 PALMO75781 387 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 IL2RBP14784 551 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 IGHMBP2P38935 993 aaKnown RBP8.71□□□□□ -1.02
VMA21-201ENST00000330374 CDR1P51861 262 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 CFAP221Q4G0U5 840 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 ALS2CLQ60I27 953 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 NLRP14Q86W24 1093 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 KIRREL3Q8IZU9 778 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 PYM1Q9BRP8 204 aaKnown RBP8.71□□□□□ -1.02
VMA21-201ENST00000330374 MFRPQ9BY79 579 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 PLAAQ9Y263 795 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.71□□□□□ -1.02
VMA21-201ENST00000330374 KIF1AQ12756 1690 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 GOLGA6L10A6NI86 522 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 CCNT1O60563 726 aaKnown RBP8.71□□□□□ -1.02
VMA21-201ENST00000330374 CNPY4Q8N129 248 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 NOX5Q96PH1 765 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 NDST4Q9H3R1 872 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 TCP11L1Q9NUJ3 509 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 TBC1D7Q9P0N9 293 aa8.71□□□□□ -1.02
VMA21-201ENST00000330374 PNPLA7Q6ZV29 1317 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CASKIN2Q8WXE0 1202 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 DDX60Q8IY21 1712 aaKnown RBP8.7□□□□□ -1.02
VMA21-201ENST00000330374 CHD4Q14839 1912 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 BICDL2A1A5D9 508 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 SPDYE16A6NNV3 312 aaPredicted RBP8.7□□□□□ -1.02
VMA21-201ENST00000330374 RHOBTB3O94955 611 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CALM1P0DP23 149 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CALM2P0DP24 149 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CALM3P0DP25 149 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CHRNDQ07001 517 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 PFKFB3Q16875 520 aaPredicted RBP8.7□□□□□ -1.02
VMA21-201ENST00000330374 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
VMA21-201ENST00000330374 FAM114A1Q8IWE2 563 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 C4orf32Q8N8J7 132 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 PRPF38AQ8NAV1 312 aaKnown RBP8.7□□□□□ -1.02
VMA21-201ENST00000330374 PURBQ96QR8 312 aaKnown RBP8.7□□□□□ -1.02
VMA21-201ENST00000330374 EPN3Q9H201 632 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 TNS3Q68CZ2 1445 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 PDHBP11177 359 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 PAK2Q13177 524 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 PTGISQ16647 500 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CCDC40Q4G0X9 1142 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 KLHDC7AQ5VTJ3 777 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 SUSD4Q5VX71 490 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CCDC121Q6ZUS5 278 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 MICALCLQ6ZW33 695 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 GLIS3Q8NEA6 775 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 MYCBPAPQ8TBZ2 947 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 SEMA6BQ9H3T3 888 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 STX8Q9UNK0 236 aa8.7□□□□□ -1.02
VMA21-201ENST00000330374 CCDC172P0C7W6 258 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 TXKP42681 527 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 CCDC13Q8IYE1 715 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 UBLCP1Q8WVY7 318 aaPredicted RBP8.69□□□□□ -1.02
VMA21-201ENST00000330374 DHTKD1Q96HY7 919 aaPredicted RBP8.69□□□□□ -1.02
VMA21-201ENST00000330374 AP1M1Q9BXS5 423 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 TRIM31Q9BZY9 425 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 TRIM9Q9C026 710 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 PLAGL2Q9UPG8 496 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 ADAMTS7Q9UKP4 1686 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 PPP2R5BQ15173 497 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 VWA3BQ502W6 1294 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 PACSIN1Q9BY11 444 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 KLC4Q9NSK0 619 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 BAZ2AQ9UIF9 1905 aaKnown RBP8.69□□□□□ -1.02
VMA21-201ENST00000330374 NID2Q14112 1375 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 SCP2P22307 547 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 FNTAP49354 379 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 SKOR1P84550 965 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 RAPGEF1Q13905 1077 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 SUFUQ9UMX1 484 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 PCDHA4Q9UN74 947 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 C1orf167Q5SNV9 1468 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 KCNK3O14649 394 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 RAD51CO43502 376 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 CALML3P27482 149 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 MDH1P40925 334 aaKnown RBP8.69□□□□□ -1.02
VMA21-201ENST00000330374 TRAPPC10P48553 1259 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 ARL6IP4Q66PJ3 421 aaKnown RBP8.69□□□□□ -1.02
VMA21-201ENST00000330374 KIAA0895Q8NCT3 520 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 TBC1D5Q92609 795 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 N4BP2L2Q92802 583 aaPredicted RBP8.69□□□□□ -1.02
VMA21-201ENST00000330374 DYNLL2Q96FJ2 89 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 HAUS2Q9NVX0 235 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 KBTBD4Q9NVX7 518 aa8.69□□□□□ -1.02
VMA21-201ENST00000330374 USP17L3A6NCW0 530 aa8.68□□□□□ -1.02
VMA21-201ENST00000330374 USP17L4A6NCW7 530 aa8.68□□□□□ -1.02
VMA21-201ENST00000330374 SPDYE5A6NIY4 337 aa8.68□□□□□ -1.02
VMA21-201ENST00000330374 SMIM23A6NLE4 172 aa8.68□□□□□ -1.02
VMA21-201ENST00000330374 DDAH1O94760 285 aa8.68□□□□□ -1.02
VMA21-201ENST00000330374 RPSAP08865 295 aaKnown RBP8.68□□□□□ -1.02
VMA21-201ENST00000330374 POLR2FP61218 127 aaKnown RBP8.68□□□□□ -1.02
VMA21-201ENST00000330374 TFAP4Q01664 338 aa8.68□□□□□ -1.02
VMA21-201ENST00000330374 KCNB1Q14721 858 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms