RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 GTF3C3Q9Y5Q9 886 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 MRVI1Q9Y6F6 885 aa17.03■□□□□ 0.32
CLRN1-203ENST00000328863 MEIS2O14770 477 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 TXNP10599 105 aaKnown RBP17.02■□□□□ 0.32
CLRN1-203ENST00000328863 ACLYP53396 1101 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 AP3B2Q13367 1082 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 GNASQ5JWF2 1037 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 KCNV1Q6PIU1 500 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 SEPT14Q6ZU15 432 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 C7orf61Q8IZ16 206 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 IL31RAQ8NI17 732 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 C22orf23Q9BZE7 217 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 RIC8AQ9NPQ8 531 aa17.02■□□□□ 0.32
CLRN1-203ENST00000328863 ESYT2A0FGR8 921 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 DYNC1LI2O43237 492 aaPredicted RBP17.01■□□□□ 0.31
CLRN1-203ENST00000328863 NEK4P51957 841 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 ATN1P54259 1190 aaPredicted RBP17.01■□□□□ 0.31
CLRN1-203ENST00000328863 NTRK3Q16288 839 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 UBE2SQ16763 222 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 LRRC26Q2I0M4 334 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 TYW1BQ6NUM6 668 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 XRRA1Q6P2D8 792 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 FERMT2Q96AC1 680 aa17.01■□□□□ 0.31
CLRN1-203ENST00000328863 STK36Q9NRP7 1315 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 CABYRO75952 493 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 DEXIO95424 95 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 GH1P01241 217 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 ASGR1P07306 291 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 RTP1P59025 263 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 BEX3Q00994 111 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
CLRN1-203ENST00000328863 SCRN1Q12765 414 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 SNX17Q15036 470 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 KCNA10Q16322 511 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 PCNX4Q63HM2 1172 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 VSIG10LQ86VR7 867 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 LARP6Q9BRS8 491 aaKnown RBP17■□□□□ 0.31
CLRN1-203ENST00000328863 C6orf50Q9HD87 102 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 TPCN1Q9ULQ1 816 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 LTBP2Q14767 1821 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 MYH7BA7E2Y1 1941 aa17■□□□□ 0.31
CLRN1-203ENST00000328863 MROH7Q68CQ1 1323 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 SMCO2A6NFE2 343 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 CTAGE5O15320 804 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 PFKFB2O60825 505 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 ARIH2O95376 493 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 FOSP01100 380 aaPredicted RBP16.99■□□□□ 0.31
CLRN1-203ENST00000328863 GNA11P29992 359 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 RBM25P49756 843 aaKnown RBP16.99■□□□□ 0.31
CLRN1-203ENST00000328863 C1orf53Q5VUE5 145 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 MCTP2Q6DN12 878 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 CCSAPQ6IQ19 270 aaPredicted RBP16.99■□□□□ 0.31
CLRN1-203ENST00000328863 CCDC62Q6P9F0 684 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 SLC39A5Q6ZMH5 540 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 REXO1Q8N1G1 1221 aaKnown RBP16.99■□□□□ 0.31
CLRN1-203ENST00000328863 BICD2Q8TD16 824 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 ANO3Q9BYT9 981 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 POLR3EQ9NVU0 708 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 DOCK5Q9H7D0 1870 aa16.99■□□□□ 0.31
CLRN1-203ENST00000328863 SCN10AQ9Y5Y9 1956 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 ELP1O95163 1332 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
CLRN1-203ENST00000328863 FIBPO43427 364 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 PKN1Q16512 942 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 NLRX1Q86UT6 975 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 FAM177A1Q8N128 213 aaPredicted RBP16.98■□□□□ 0.31
CLRN1-203ENST00000328863 GTF3C6Q969F1 213 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 INPP4AQ96PE3 977 aaPredicted RBP16.98■□□□□ 0.31
CLRN1-203ENST00000328863 ZMYND12Q9H0C1 365 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 SH3GLB2Q9NR46 395 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 PCDHA6Q9UN73 950 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 ATP11BQ9Y2G3 1177 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 PCDHA8Q9Y5H6 950 aa16.98■□□□□ 0.31
CLRN1-203ENST00000328863 PPFIA3O75145 1194 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 TGFB3P10600 412 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 UBA1P22314 1058 aaKnown RBP16.97■□□□□ 0.31
CLRN1-203ENST00000328863 PTGS1P23219 599 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 IRX5P78411 483 aaPredicted RBP16.97■□□□□ 0.31
CLRN1-203ENST00000328863 ARHGAP1Q07960 439 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 TRIM60Q495X7 471 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 TMEM63BQ5T3F8 832 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 COPS5Q92905 334 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 EMID1Q96A84 441 aaPredicted RBP16.97■□□□□ 0.31
CLRN1-203ENST00000328863 VTI1AQ96AJ9 217 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 CDHR1Q96JP9 859 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 VPS54Q9P1Q0 977 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 PRKAG2Q9UGJ0 569 aa16.97■□□□□ 0.31
CLRN1-203ENST00000328863 DDX41Q9UJV9 622 aaKnown RBP16.97■□□□□ 0.31
CLRN1-203ENST00000328863 H0YGN5 161 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 KPNA6O60684 536 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 RGS20O76081 388 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 MMP3P08254 477 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 XBP1P17861 261 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 ICAM3P32942 547 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 CLK2P49760 499 aaKnown RBP16.96■□□□□ 0.31
CLRN1-203ENST00000328863 MRPS9P82933 396 aaKnown RBP16.96■□□□□ 0.31
CLRN1-203ENST00000328863 RABEP1Q15276 862 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 LY6KQ17RY6 165 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 CXCL17Q6UXB2 119 aa16.96■□□□□ 0.31
CLRN1-203ENST00000328863 IL27Q8NEV9 243 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms