RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 ZNF668Q96K58 619 aaPredicted RBP17.71■□□□□ 0.43
SYNM-201ENST00000328642 MRPL11Q9Y3B7 192 aaKnown RBP17.71■□□□□ 0.43
SYNM-201ENST00000328642 ACTN4O43707 911 aaKnown RBP17.71■□□□□ 0.43
SYNM-201ENST00000328642 CCNE1P24864 410 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 GADL1Q6ZQY3 521 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 ANKRD35Q8N283 1001 aa17.71■□□□□ 0.43
SYNM-201ENST00000328642 ZNF579Q8NAF0 562 aaKnown RBP17.71■□□□□ 0.43
SYNM-201ENST00000328642 A0A087X0B3 334 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 CYTH3O43739 400 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 DALRD3Q5D0E6 543 aaKnown RBP17.71■□□□□ 0.42
SYNM-201ENST00000328642 CEP112Q8N8E3 955 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 CCDC94Q9BW85 323 aaPredicted RBP17.71■□□□□ 0.42
SYNM-201ENST00000328642 GLT8D2Q9H1C3 349 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 JMJD4Q9H9V9 463 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 EMILIN3Q9NT22 766 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 FZD1Q9UP38 647 aa17.71■□□□□ 0.42
SYNM-201ENST00000328642 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.42
SYNM-201ENST00000328642 K7ENM7 598 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
SYNM-201ENST00000328642 ASIC2Q16515 512 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 BANK1Q8NDB2 785 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 EHBP1Q8NDI1 1231 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 ANAPC4Q9UJX5 808 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 CDC25BP30305 580 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 CHP1Q99653 195 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 GBP3Q9H0R5 595 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 SALL1Q9NSC2 1324 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 POLRMTO00411 1230 aaKnown RBP17.7■□□□□ 0.42
SYNM-201ENST00000328642 PSMD14O00487 310 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 SFMBT2Q5VUG0 894 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 NAA35Q5VZE5 725 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 KRT26Q7Z3Y9 468 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 TAOK3Q9H2K8 898 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 MYO1AQ9UBC5 1043 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 RWDD2AQ9UIY3 292 aa17.7■□□□□ 0.42
SYNM-201ENST00000328642 GOLGA8IPA6NC78 632 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 GOLGA8JA6NMD2 632 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 SRGAP2O75044 1071 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 DPEP1P16444 411 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 E4F1Q66K89 784 aaPredicted RBP17.69■□□□□ 0.42
SYNM-201ENST00000328642 PPP1R16BQ96T49 567 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 TSPYL1Q9H0U9 437 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 VPS18Q9P253 973 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 TTC26A0AVF1 554 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 SLC37A4O43826 429 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 RCSD1Q6JBY9 416 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 PHLDB2Q86SQ0 1253 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 U2AF1L4Q8WU68 220 aaKnown RBP17.69■□□□□ 0.42
SYNM-201ENST00000328642 PIM2Q9P1W9 311 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 FXR1P51114 621 aaKnown RBP eCLIP17.69■□□□□ 0.42
SYNM-201ENST00000328642 NCAPG2Q86XI2 1143 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 AK8Q96MA6 479 aa17.69■□□□□ 0.42
SYNM-201ENST00000328642 RGPD5Q99666 1765 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 CCZ1BP86790 482 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 CCZ1P86791 482 aaPredicted RBP17.68■□□□□ 0.42
SYNM-201ENST00000328642 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 RASA3Q14644 834 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 ANKRD40Q6AI12 368 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 TUBE1Q9UJT0 475 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 ZHX2Q9Y6X8 837 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 CEP104O60308 925 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 IFFO1Q0D2I5 559 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 GLG1Q92896 1179 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 ABCB11O95342 1321 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 GSTTP1A0A1W2PQM5 241 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 KLK7P49862 253 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 SEPT14Q6ZU15 432 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 SLFN12Q8IYM2 578 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 FAM133AQ8N9E0 248 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 ZNF384Q8TF68 577 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 NAP1L4Q99733 375 aaKnown RBP17.68■□□□□ 0.42
SYNM-201ENST00000328642 MTA3Q9BTC8 594 aa17.68■□□□□ 0.42
SYNM-201ENST00000328642 TNFAIP3P21580 790 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 IRX3P78415 501 aaPredicted RBP17.67■□□□□ 0.42
SYNM-201ENST00000328642 FKBP3Q00688 224 aaKnown RBP17.67■□□□□ 0.42
SYNM-201ENST00000328642 TRIM14Q14142 442 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 KIAA0753Q2KHM9 967 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 CERS5Q8N5B7 392 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 WDR24Q96S15 920 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 NDST4Q9H3R1 872 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 CALUO43852 315 aaPredicted RBP17.67■□□□□ 0.42
SYNM-201ENST00000328642 MAP9Q49MG5 647 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 SFR1Q86XK3 245 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 CCDC155Q8N6L0 562 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 TRIM9Q9C026 710 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 ADAMTS1Q9UHI8 967 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.67■□□□□ 0.42
SYNM-201ENST00000328642 SETD1AO15047 1707 aaKnown RBP17.67■□□□□ 0.42
SYNM-201ENST00000328642 PPP4CP60510 307 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 KSR1Q8IVT5 923 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 WRNIP1Q96S55 665 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 KDM3AQ9Y4C1 1321 aa17.67■□□□□ 0.42
SYNM-201ENST00000328642 TLDC2A0PJX2 215 aa17.66■□□□□ 0.42
SYNM-201ENST00000328642 LAD1O00515 517 aa17.66■□□□□ 0.42
SYNM-201ENST00000328642 ERLIN2O94905 339 aa17.66■□□□□ 0.42
SYNM-201ENST00000328642 FNBP1Q96RU3 617 aa17.66■□□□□ 0.42
SYNM-201ENST00000328642 TRIM10Q9UDY6 481 aa17.66■□□□□ 0.42
SYNM-201ENST00000328642 MRC1P22897 1456 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms