RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 DHRS4Q9BTZ2 278 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 NKX2-4Q9H2Z4 354 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 BCAS3Q9H6U6 928 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 CYP26B1Q9NR63 512 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 TMEM260Q9NX78 707 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 MRPS23Q9Y3D9 190 aaKnown RBP5.69□□□□□ -1.5
SKP1-201ENST00000328392 IRAK3Q9Y616 596 aa5.69□□□□□ -1.5
SKP1-201ENST00000328392 SBNO2Q9Y2G9 1366 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 ANKRD62A6NC57 917 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 DLX3O60479 287 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 TMEM62Q0P6H9 643 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 KRTAP19-4Q3LI73 84 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 EGFLAMQ63HQ2 1017 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 OLFML2BQ68BL8 750 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 C16orf86Q6ZW13 317 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 SIAH1Q8IUQ4 282 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 LZTR1Q8N653 840 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 NPLOC4Q8TAT6 608 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 TMEFF2Q9UIK5 374 aaPredicted RBP5.68□□□□□ -1.5
SKP1-201ENST00000328392 IRS2Q9Y4H2 1338 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 ADAMTS20P59510 1910 aa5.68□□□□□ -1.5
SKP1-201ENST00000328392 ENPP3O14638 875 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
SKP1-201ENST00000328392 FUCA1P04066 466 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 FBLN1P23142 703 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 GYS2P54840 703 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 GFRA1P56159 465 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 ZNF385BQ569K4 471 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 CCDC103Q8IW40 242 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 SCUBE1Q8IWY4 988 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 DHX37Q8IY37 1157 aaKnown RBP5.67□□□□□ -1.5
SKP1-201ENST00000328392 JMYQ8N9B5 988 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 DACT3Q96B18 629 aaPredicted RBP5.67□□□□□ -1.5
SKP1-201ENST00000328392 MMP19Q99542 508 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 SLKQ9H2G2 1235 aaPredicted RBP5.67□□□□□ -1.5
SKP1-201ENST00000328392 NDOR1Q9UHB4 597 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 SIT1Q9Y3P8 196 aa5.67□□□□□ -1.5
SKP1-201ENST00000328392 NPHS1O60500 1241 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 FGFR1P11362 822 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 IGFBP6P24592 240 aaPredicted RBP5.66□□□□□ -1.5
SKP1-201ENST00000328392 HOXC12P31275 282 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 LIMS1P48059 325 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 TCEA2Q15560 299 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 VMACQ2NL98 169 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 DENND5AQ6IQ26 1287 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 FAM129CQ86XR2 697 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 PPIL6Q8IXY8 311 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 KREMEN2Q8NCW0 462 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 PLEKHO2Q8TD55 490 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 USP33Q8TEY7 942 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 KCTD13Q8WZ19 329 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 BTG4Q9NY30 223 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 DBR1Q9UK59 544 aaKnown RBP5.66□□□□□ -1.5
SKP1-201ENST00000328392 TRAF6Q9Y4K3 522 aa5.66□□□□□ -1.5
SKP1-201ENST00000328392 TRBV23OR9-2A0A075B6M9 112 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 RFXAPO00287 272 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 NTRK1P04629 796 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 CAPNS1P04632 268 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 ATF2P15336 505 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 MC3RP41968 323 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 SUMO1P63165 101 aaKnown RBP5.65□□□□□ -1.5
SKP1-201ENST00000328392 CNKSR3Q6P9H4 555 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 KCNT2Q6UVM3 1135 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 TEX2Q8IWB9 1127 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
SKP1-201ENST00000328392 NCOA5Q9HCD5 579 aaKnown RBP5.65□□□□□ -1.5
SKP1-201ENST00000328392 MARCH2Q9P0N8 246 aa5.65□□□□□ -1.5
SKP1-201ENST00000328392 NTRK3Q16288 839 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 LONRF2Q1L5Z9 754 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 PLEKHG4Q58EX7 1191 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 TCERG1LQ5VWI1 586 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 WWC2Q6AWC2 1192 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 PWWP2AQ96N64 755 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 CLUHP3Q96NS8 147 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 FEZ1Q99689 392 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.64□□□□□ -1.51
SKP1-201ENST00000328392 FBXL7Q9UJT9 491 aa5.64□□□□□ -1.51
SKP1-201ENST00000328392 MEFVO15553 781 aaPredicted RBP5.63□□□□□ -1.51
SKP1-201ENST00000328392 SCG5P05408 212 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 ASGR2P07307 311 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 LCP1P13796 627 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 BMP7P18075 431 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 FPR2P25090 351 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 PMLP29590 882 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 AFF3P51826 1226 aaKnown RBP5.63□□□□□ -1.51
SKP1-201ENST00000328392 PABPC4Q13310 644 aaKnown RBP eCLIP5.63□□□□□ -1.51
SKP1-201ENST00000328392 CNNM4Q6P4Q7 775 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 FILIP1Q7Z7B0 1213 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 KIAA0907Q7Z7F0 614 aaPredicted RBP5.63□□□□□ -1.51
SKP1-201ENST00000328392 CABP7Q86V35 215 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 ALG3Q92685 438 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 C1orf159Q96HA4 380 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 CCDC140Q96MF4 163 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 PHF20Q9BVI0 1012 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 SFMBT1Q9UHJ3 866 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 ASXL2Q76L83 1435 aa5.63□□□□□ -1.51
SKP1-201ENST00000328392 C22orf46C9J442 243 aa5.62□□□□□ -1.51
SKP1-201ENST00000328392 TRIM13O60858 407 aa5.62□□□□□ -1.51
SKP1-201ENST00000328392 CPP00450 1065 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms