RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 COA1Q9GZY4 146 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 RASSF4Q9H2L5 321 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 ADAMTS1Q9UHI8 967 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 ATP8B1O43520 1251 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 BMP3P12645 472 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 HOXA13P31271 388 aaPredicted RBP15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 KIF11P52732 1056 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 SF3A3Q12874 501 aaKnown RBP eCLIP15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 PTPAQ15257 358 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 RBM43Q6ZSC3 357 aaKnown RBP15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 TMC4Q7Z404 712 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 POTEDQ86YR6 584 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 IKBKGQ9Y6K9 419 aa15.14■□□□□ 0.01
DNMT3B-202ENST00000328111 K7ENM7 598 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 CDC37Q16543 378 aaPredicted RBP15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 KRT71Q3SY84 523 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 NIM1KQ8IY84 436 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 SIGLEC1Q9BZZ2 1709 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 ZBED4O75132 1171 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 FTCDO95954 541 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 ATP1A2P50993 1020 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 CCDC91Q7Z6B0 441 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 ABCB6Q9NP58 842 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 SRGAP2O75044 1071 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 NLRX1Q86UT6 975 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 CCDC105Q8IYK2 499 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 CNKSR1Q969H4 720 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 STMN4Q9H169 189 aaPredicted RBP15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 FAN1Q9Y2M0 1017 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 RICTORQ6R327 1708 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 ECM2O94769 699 aaPredicted RBP15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 NT5C2P49902 561 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 C2orf54Q08AI8 447 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 ZRSR2Q15696 482 aaKnown RBP15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 CC2D2BQ6DHV5 1058 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 NEDD1Q8NHV4 660 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 ANO3Q9BYT9 981 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 BHMT2Q9H2M3 363 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 CEP83Q9Y592 693 aa15.13■□□□□ 0.01
DNMT3B-202ENST00000328111 TDP2O95551 362 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 MYCNP04198 464 aaPredicted RBP15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 LRRC63Q05C16 580 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 TROAPQ12815 778 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 CEP85LQ5SZL2 805 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 RUFY4Q6ZNE9 571 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 UNC13DQ70J99 1090 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 PPM1KQ8N3J5 372 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 KRT12Q99456 494 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 DHX36Q9H2U1 1008 aaKnown RBP15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 MED4Q9NPJ6 270 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 ASIC3Q9UHC3 531 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 JRKLQ9Y4A0 524 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 SLIT1O75093 1534 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 MMP10P09238 476 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 EZRP15311 586 aaKnown RBP15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 HPS3Q969F9 1004 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 DPH5Q9H2P9 285 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 USP17L10C9JJH3 530 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 NEBLO76041 1014 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 FCER1AP12319 257 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 GPSM2P81274 684 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 XKR9Q5GH70 373 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 ANKS4BQ8N8V4 417 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 GIMAP7Q8NHV1 300 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 NSRP1Q9H0G5 558 aaKnown RBP15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 FAM204AQ9H8W3 233 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 CCPG1Q9ULG6 757 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 PCDHA13Q9Y5I0 950 aa15.12■□□□□ 0.01
DNMT3B-202ENST00000328111 ATP2A1O14983 1001 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 KLRK1P26718 216 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 GYS2P54840 703 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 STRN3Q13033 797 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 FLAD1Q8NFF5 587 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 FAM71BQ8TC56 605 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 TEKT3Q9BXF9 490 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 FAM184BQ9ULE4 1060 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 SORBS3O60504 671 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 PRPF6O94906 941 aaKnown RBP15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 VIMP08670 466 aaKnown RBP15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 FXR1P51114 621 aaKnown RBP eCLIP15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 KCTD16Q68DU8 428 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 ZCCHC17Q9NP64 241 aaKnown RBP15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 A0A1B0GTH6 734 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 SFI1A8K8P3 1242 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 RAD17O75943 681 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 TNNI1P19237 187 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 CASP8Q14790 479 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 CLEC10AQ8IUN9 316 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 FAM186BQ8IYM0 893 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 LINC00116Q8NCU8 138 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 USTQ9Y2C2 406 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 E9PMD0 336 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 AFPP02771 609 aaKnown RBP15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 CTNNA1P35221 906 aaKnown RBP15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 PSMD2Q13200 908 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 ZNF365Q70YC5 407 aa15.11■□□□□ 0.01
DNMT3B-202ENST00000328111 TC2NQ8N9U0 490 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 1129.1 ms