RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 TGFBRAP1Q8WUH2 860 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 TUBB6Q9BUF5 446 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 ZNF229Q9UJW7 825 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 LRRC14Q15048 493 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 EXT2Q93063 718 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 ZSWIM6Q9HCJ5 1215 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 DCTN4Q9UJW0 460 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 FNDC3AQ9Y2H6 1198 aaKnown RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 MAGOHP61326 146 aaKnown RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 DEUP1Q05D60 604 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 LMNAP02545 664 aaKnown RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 EPHB1P54762 984 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.82■□□□□ 0.44
SMAD3-201ENST00000327367 SPATA17Q96L03 361 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 ZMYM6O95789 1325 aa17.82■□□□□ 0.44
SMAD3-201ENST00000327367 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
SMAD3-201ENST00000327367 MRPS15P82914 257 aaKnown RBP17.81■□□□□ 0.44
SMAD3-201ENST00000327367 RYBPQ8N488 228 aaPredicted RBP17.81■□□□□ 0.44
SMAD3-201ENST00000327367 SERPINI1Q99574 410 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 NT5C3AQ9H0P0 336 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
SMAD3-201ENST00000327367 RASSF10A6NK89 507 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 ATP1A3P13637 1013 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 TRIM42Q8IWZ5 723 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 FBXL13Q8NEE6 735 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 KRT1P04264 644 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 GFAPP14136 432 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 NLRP14Q86W24 1093 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 PGBD1Q96JS3 809 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 THRAP3Q9Y2W1 955 aaKnown RBP17.81■□□□□ 0.44
SMAD3-201ENST00000327367 GAS7O60861 476 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 C6orf118Q5T5N4 469 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 FAM161BQ96MY7 647 aa17.81■□□□□ 0.44
SMAD3-201ENST00000327367 PI4K2BG5E9Z4 385 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 SEC24DO94855 1032 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 LIG4P49917 911 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 PPARAQ07869 468 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 SESTD1Q86VW0 696 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 CCDC124Q96CT7 223 aaKnown RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 GTPBP10A4D1E9 387 aaKnown RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 S100BP04271 92 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 DDIT3P35638 169 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 RAB44Q7Z6P3 723 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 KDM3AQ9Y4C1 1321 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 UBE3AQ05086 875 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 IDI1Q13907 227 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 VSTM4Q8IW00 320 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 ZNF274Q96GC6 653 aaPredicted RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 TSC22D4Q9Y3Q8 395 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 MYO1FO00160 1098 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 NDUFA10O95299 355 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 KIF19Q2TAC6 998 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 OLA1Q9NTK5 396 aaKnown RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 PCDHB4Q9Y5E5 795 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 ZMYM4Q5VZL5 1548 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 LMNB1P20700 586 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 MAP3K7CLP57077 242 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 NSMFQ6X4W1 530 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 FAM186BQ8IYM0 893 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 METTL13Q8N6R0 699 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 SPATA5Q8NB90 893 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 SNRNP27Q8WVK2 155 aaKnown RBP17.8■□□□□ 0.44
SMAD3-201ENST00000327367 RGS12O14924 1447 aa17.8■□□□□ 0.44
SMAD3-201ENST00000327367 CLIC2O15247 247 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DCTN3O75935 186 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 OATP04181 439 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 CYP4A11Q02928 519 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 BBS9Q3SYG4 887 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 ARMCX5Q6P1M9 558 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DEPTORQ8TB45 409 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DACH2Q96NX9 599 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 ING2Q9H160 280 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 OR52Z1P0C646 297 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 HLA-DPA1P20036 260 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 MARCH10Q8NA82 808 aaPredicted RBP17.79■□□□□ 0.44
SMAD3-201ENST00000327367 ZNF280CQ8ND82 737 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DISC1Q9NRI5 854 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 SFMBT1Q9UHJ3 866 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DBNLQ9UJU6 430 aaKnown RBP17.79■□□□□ 0.44
SMAD3-201ENST00000327367 HIBADHP31937 336 aaKnown RBP17.79■□□□□ 0.44
SMAD3-201ENST00000327367 SEPT2Q15019 361 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 KRT31Q15323 416 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 MUM1L1Q5H9M0 696 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DARS2Q6PI48 645 aaKnown RBP17.79■□□□□ 0.44
SMAD3-201ENST00000327367 CCDC24Q8N4L8 307 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 IL17RAQ96F46 866 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 A6NJR5 290 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 IQCB1Q15051 598 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 PCGF5Q86SE9 256 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 CATSPER3Q86XQ3 398 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 CARD14Q9BXL6 1004 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 CYP4F11Q9HBI6 524 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 RHBDL2Q9NX52 303 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 SUCLA2Q9P2R7 463 aaPredicted RBP17.79■□□□□ 0.44
SMAD3-201ENST00000327367 DDX25Q9UHL0 483 aaKnown RBP17.79■□□□□ 0.44
SMAD3-201ENST00000327367 GOLGA8QA0A0J9YX86 632 aa17.79■□□□□ 0.44
SMAD3-201ENST00000327367 GOLGA8OA6NCC3 632 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms