RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 MYO9BQ13459 2157 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 E7EWF7 191 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 MMP3P08254 477 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 TGFB3P10600 412 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 EIF2AK2P19525 551 aaKnown RBP20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 TROAPQ12815 778 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 WTAPQ15007 396 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 VSIG10LQ86VR7 867 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 VWCEQ96DN2 955 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 SCLYQ96I15 445 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 GAS2L1Q99501 681 aaPredicted RBP20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 MAP3K14Q99558 947 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 SLC28A3Q9HAS3 691 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 NOD1Q9Y239 953 aa20.55■□□□□ 0.88
PTPMT1-201ENST00000326656 PPP1R11O60927 126 aaPredicted RBP20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 IQCF3P0C7M6 154 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 CCDC155Q8N6L0 562 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 CAGE1Q8TC20 777 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 PDCD2LQ9BRP1 358 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 PCDHA11Q9Y5I1 949 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 MRVI1Q9Y6F6 885 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 CDH23Q9H251 3354 aa20.54■□□□□ 0.88
PTPMT1-201ENST00000326656 PNMA6FA0A0J9YX94 578 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 PPFIA4O75335 1185 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 PARNO95453 639 aaKnown RBP20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 CATIPQ7Z7H3 387 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 PPTC7Q8NI37 304 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 PHOSPHO2Q8TCD6 241 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 KATNAL1Q9BW62 490 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 PRUNE2Q8WUY3 3088 aa20.53■□□□□ 0.88
PTPMT1-201ENST00000326656 EYSQ5T1H1 3165 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 GCOM1H8Y6P7 765 aaPredicted RBP20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 POLR2MP0CAP2 368 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 ATP2A2P16615 1042 aaKnown RBP20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 SMARCA1P28370 1054 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 PTGISQ16647 500 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 TMEM67Q5HYA8 995 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 DHX37Q8IY37 1157 aaKnown RBP20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 TMTC2Q8N394 836 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 IGDCC4Q8TDY8 1250 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 KAT2BQ92831 832 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 PIGSQ96S52 555 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 VCANP13611 3396 aa20.52■□□□□ 0.88
PTPMT1-201ENST00000326656 MYH7BA7E2Y1 1941 aa20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 BAZ2BQ9UIF8 2168 aaKnown RBP20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 ZBBXA8MT70 800 aa20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 HOXD8P13378 290 aaPredicted RBP20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 RBL2Q08999 1139 aa20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 CHST3Q7LGC8 479 aa20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 AFAP1L1Q8TED9 768 aa20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 GBF1Q92538 1859 aa20.51■□□□□ 0.87
PTPMT1-201ENST00000326656 CYTH3O43739 400 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 STAM2O75886 525 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 RGS20O76081 388 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 BAIAP3O94812 1187 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 F2P00734 622 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 KIF5BP33176 963 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 PGM5Q15124 567 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 SLC35G1Q2M3R5 365 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 MYSM1Q5VVJ2 828 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 DEFB128Q7Z7B8 93 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 HOMER1Q86YM7 354 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 MB21D2Q8IYB1 491 aaPredicted RBP20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 C7orf31Q8N865 590 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 SYMPKQ92797 1274 aaKnown RBP20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 SLC9A7Q96T83 725 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 LZTS2Q9BRK4 669 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 NKX2-4Q9H2Z4 354 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 PRDM12Q9H4Q4 367 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 GTF2IRD1Q9UHL9 959 aa20.5■□□□□ 0.87
PTPMT1-201ENST00000326656 SCN5AQ14524 2016 aa20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 TRIP12Q14669 1992 aaPredicted RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 HAS3O00219 553 aa20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 MYCLP12524 364 aaPredicted RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 CCND2P30279 289 aa20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 HOXA13P31271 388 aaPredicted RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 CELF3Q5SZQ8 465 aaKnown RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 GDF6Q6KF10 455 aaPredicted RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 YBX2Q9Y2T7 364 aaKnown RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 RBM8AQ9Y5S9 174 aaKnown RBP20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 TANC1Q9C0D5 1861 aa20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 TRANK1O15050 2925 aa20.49■□□□□ 0.87
PTPMT1-201ENST00000326656 SELPP16109 830 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 PSEN2P49810 448 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 ANTXR2P58335 489 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 CHMP4BP1P59074 171 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 CTCFLQ8NI51 663 aaPredicted RBP20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 CTAGE1Q96RT6 745 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 SPZ1Q9BXG8 430 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 FTOQ9C0B1 505 aaKnown RBP eCLIP20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 SENP2Q9HC62 589 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 TAF6LQ9Y6J9 622 aa20.48■□□□□ 0.87
PTPMT1-201ENST00000326656 CHD7Q9P2D1 2997 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 DDAH1O94760 285 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 MCM5P33992 734 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 GNAQP50148 359 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 RABGGTBP53611 331 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 IRX6P78412 446 aaPredicted RBP20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 PPP2R2DQ66LE6 453 aa20.47■□□□□ 0.87
PTPMT1-201ENST00000326656 XRRA1Q6P2D8 792 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms