RNA–Protein interactions for RNA: ENST00000326298.8

CCNC-201, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 2,212 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-201ENST00000326298 HSD17B4P51659 736 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 ADGRE1Q14246 886 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 GRM4Q14833 912 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 WNT8BQ93098 351 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 TIFAQ96CG3 184 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.89
CCNC-201ENST00000326298 PRDM12Q9H4Q4 367 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 RIOX1Q9H6W3 641 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.89
CCNC-201ENST00000326298 PCDHA1Q9Y5I3 950 aa9.46□□□□□ -0.89
CCNC-201ENST00000326298 TRIP12Q14669 1992 aaPredicted RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 RAD50Q92878 1312 aa9.46□□□□□ -0.9
CCNC-201ENST00000326298 NR3C2P08235 984 aa9.46□□□□□ -0.9
CCNC-201ENST00000326298 CPT1AP50416 773 aa9.46□□□□□ -0.9
CCNC-201ENST00000326298 ZNF200P98182 395 aaPredicted RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 GDF6Q6KF10 455 aaPredicted RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 TMCO2Q7Z6W1 182 aaPredicted RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 NSUN6Q8TEA1 469 aaKnown RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 HERVK_113Q902F9 699 aa9.46□□□□□ -0.9
CCNC-201ENST00000326298 DHX38Q92620 1227 aaKnown RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 AMNQ9BXJ7 453 aa9.46□□□□□ -0.9
CCNC-201ENST00000326298 LSG1Q9H089 658 aaKnown RBP9.46□□□□□ -0.9
CCNC-201ENST00000326298 LOC102724159A0A0B4J2E5 919 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 hCG_1642624A0A1W2PR95 340 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 ZEB2O60315 1214 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 FGBP02675 491 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 ZNF286BP0CG31 522 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 MYCLP12524 364 aaPredicted RBP9.45□□□□□ -0.9
CCNC-201ENST00000326298 FOSL2P15408 326 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 PWP2Q15269 919 aaKnown RBP9.45□□□□□ -0.9
CCNC-201ENST00000326298 HSDL1Q3SXM5 330 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 CCDC178Q5BJE1 867 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 ARHGEF16Q5VV41 709 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 PDCD2LQ9BRP1 358 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 LRRC2Q9BYS8 371 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 OSBPL7Q9BZF2 842 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 NKX2-4Q9H2Z4 354 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 LY9Q9HBG7 655 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 POLR3EQ9NVU0 708 aa9.45□□□□□ -0.9
CCNC-201ENST00000326298 MRPL11Q9Y3B7 192 aaKnown RBP9.45□□□□□ -0.9
CCNC-201ENST00000326298 U3KPZ7 1027 aaPredicted RBP9.45□□□□□ -0.9
CCNC-201ENST00000326298 PLEKHA8P1O95397 391 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 GHRHRQ02643 423 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 STXBP2Q15833 593 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 PSRC1Q6PGN9 363 aaPredicted RBP9.44□□□□□ -0.9
CCNC-201ENST00000326298 FCHSD1Q86WN1 690 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 MYH7BA7E2Y1 1941 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 MRPS9P82933 396 aaKnown RBP9.44□□□□□ -0.9
CCNC-201ENST00000326298 WTAPQ15007 396 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 PGM5Q15124 567 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 TMEM67Q5HYA8 995 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 NCOA7Q8NI08 942 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 PPM1EQ8WY54 764 aa9.44□□□□□ -0.9
CCNC-201ENST00000326298 PRRC2BQ5JSZ5 2229 aaKnown RBP9.44□□□□□ -0.9
CCNC-201ENST00000326298 C5orf42Q9H799 3197 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 DOCK5Q9H7D0 1870 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 RFXAPO00287 272 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 NKRFO15226 690 aaKnown RBP eCLIP9.43□□□□□ -0.9
CCNC-201ENST00000326298 GH1P01241 217 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 IQCF3P0C7M6 154 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 TRDNQ13061 729 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 SEMA3FQ13275 785 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 VSIG10LQ86VR7 867 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 SRBD1Q8N5C6 995 aaKnown RBP9.43□□□□□ -0.9
CCNC-201ENST00000326298 TCEANC2Q96MN5 208 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 IWS1Q96ST2 819 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 ALG1Q9BT22 464 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 CERS4Q9HA82 394 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 HDAC6Q9UBN7 1215 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 PNMA2Q9UL42 364 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 MRVI1Q9Y6F6 885 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 PTPRSQ13332 1948 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 NCOR1O75376 2440 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 EPOPA6NHQ4 379 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 ZBBXA8MT70 800 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 SLC27A2O14975 620 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 EIF3JO75822 258 aaKnown RBP9.43□□□□□ -0.9
CCNC-201ENST00000326298 UBA1P22314 1058 aaKnown RBP9.43□□□□□ -0.9
CCNC-201ENST00000326298 MBTPS1Q14703 1052 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 PTGISQ16647 500 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 KRT40Q6A162 431 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 RALYLQ86SE5 291 aaKnown RBP9.43□□□□□ -0.9
CCNC-201ENST00000326298 RUFY2Q8WXA3 655 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 ESYT1Q9BSJ8 1104 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 RTEL1Q9NZ71 1219 aa9.43□□□□□ -0.9
CCNC-201ENST00000326298 PNMA6FA0A0J9YX94 578 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 PRC1O43663 620 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 NT5C2P49902 561 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 NECTIN1Q15223 517 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 CCDC85BQ15834 202 aaPredicted RBP9.42□□□□□ -0.9
CCNC-201ENST00000326298 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 ZNF654Q8IZM8 581 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 CCDC82Q8N4S0 544 aa9.42□□□□□ -0.9
CCNC-201ENST00000326298 HAS3O00219 553 aa9.41□□□□□ -0.9
CCNC-201ENST00000326298 SH2B2O14492 632 aaPredicted RBP9.41□□□□□ -0.9
CCNC-201ENST00000326298 MEIS2O14770 477 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms