RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 RETREG2Q8NC44 543 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 TAF4BQ92750 862 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 ZMYND12Q9H0C1 365 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 CUEDC2Q9H467 287 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 GGA1Q9UJY5 639 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.27□□□□□ -0.135e-10■□□□□ 10
HMGCS1-201ENST00000325110 EHHADHQ08426 723 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 TCP10Q12799 353 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 FAM26FQ5R3K3 315 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 TTBK2Q6IQ55 1244 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 DNAAF5Q86Y56 855 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 NOX5Q96PH1 765 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 LUC7LQ9NQ29 371 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 PCDHA12Q9UN75 941 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 JRKLQ9Y4A0 524 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 HYOU1Q9Y4L1 999 aa14.27□□□□□ -0.13
HMGCS1-201ENST00000325110 HSF2BPO75031 334 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 MYL1P05976 194 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 SLC9C1Q4G0N8 1177 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 MAATS1Q7Z4T9 603 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 DDX25Q9UHL0 483 aaKnown RBP14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 HPCAL4Q9UM19 191 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 NPHP3-ACAD11A0A0J9YXS1 232 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 E9PMD0 336 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 SNAP25P60880 206 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 FAM196AQ6ZSG2 479 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 TBC1D5Q92609 795 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 CD209Q9NNX6 404 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 PANK4Q9NVE7 773 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 ADAMTS1Q9UHI8 967 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 CHD4Q14839 1912 aa14.26□□□□□ -0.13
HMGCS1-201ENST00000325110 MEIS1O00470 390 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 CCT5P48643 541 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GRB10Q13322 594 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 SPATA4Q8NEY3 305 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 RPGRIP1Q96KN7 1286 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 OSBPL9Q96SU4 736 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 BCCIPQ9P287 314 aaKnown RBP eCLIP14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 FEZ2Q9UHY8 353 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 SNX12Q9UMY4 172 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 MYH13Q9UKX3 1938 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 DUOX1Q9NRD9 1551 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L15C9J2P7 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L13C9JLJ4 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L11C9JVI0 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L18D6R9N7 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L22D6RA61 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L17D6RBQ6 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L19D6RCP7 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L20D6RJB6 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 ZNF263O14978 683 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GUCY2DQ02846 1103 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 KLHL30Q0D2K2 578 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L24Q0WX57 530 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 SFMBT2Q5VUG0 894 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 USP17L6PQ6QN14 398 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 KCNK18Q7Z418 384 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GPBP1Q86WP2 473 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 FAM133AQ8N9E0 248 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 PROCA1Q8NCQ7 364 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GOLPH3Q9H4A6 298 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 RPS6KA4O75676 772 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 AKR1B1P15121 316 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 PRPHP41219 470 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GPSM2P81274 684 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GRAPQ13588 217 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 KIAA0753Q2KHM9 967 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 UNC13DQ70J99 1090 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 GRAPLQ8TC17 118 aaPredicted RBP14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 C7orf25Q9BPX7 421 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 UBXN6Q9BZV1 441 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 FLT1P17948 1338 aa14.25□□□□□ -0.13
HMGCS1-201ENST00000325110 CYP4A11Q02928 519 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 USH1GQ495M9 461 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 MIIPQ5JXC2 388 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 CICQ96RK0 1608 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 PLCG2P16885 1265 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 CACNB3P54284 484 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 PAPD7Q5XG87 772 aaKnown RBP14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 WDR93Q6P2C0 686 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 CCNI2Q6ZMN8 369 aaPredicted RBP14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 NEDD1Q8NHV4 660 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 SPZ1Q9BXG8 430 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 EHD4Q9H223 541 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 MAGEF1Q9HAY2 307 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 LEMD3Q9Y2U8 911 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 SAMM50Q9Y512 469 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 ZNF76P36508 570 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 STAT3P40763 770 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 PPP1R2P41236 205 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 GNGT1P63211 74 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 PRPF4BQ13523 1007 aaKnown RBP14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 DOK7Q18PE1 504 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 SRLQ86TD4 932 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 KRT12Q99456 494 aa14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 MMTAG2Q9BU76 263 aaKnown RBP14.24□□□□□ -0.13
HMGCS1-201ENST00000325110 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms