RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 KMT5BQ4FZB7 885 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 LRRC49Q8IUZ0 686 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 OR9Q1Q8NGQ5 310 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 SBNO2Q9Y2G9 1366 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 SRRM1Q8IYB3 904 aaKnown RBP10.52□□□□□ -0.73
COL12A1-201ENST00000322507 OR8K1Q8NGG5 319 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 LRRC2Q9BYS8 371 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 YIPF3Q9GZM5 350 aa10.52□□□□□ -0.73
COL12A1-201ENST00000322507 RIOK3O14730 519 aaKnown RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 KRT9P35527 623 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 DRP2Q13474 957 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 RSAD2Q8WXG1 361 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 LAMC1P11047 1609 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 S100A5P33763 92 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 TFCP2Q12800 502 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 HADHQ16836 314 aaKnown RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 KRT12Q99456 494 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 RPAP3Q9H6T3 665 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 NLRX1Q86UT6 975 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 COG4Q9H9E3 785 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 STOML1Q9UBI4 398 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 IVNS1ABPQ9Y6Y0 642 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 PRPF6O94906 941 aaKnown RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 CDC37L1Q7L3B6 337 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 CDKL2Q92772 493 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 RNF34Q969K3 372 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 DONSONQ9NYP3 566 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 CAPN11Q9UMQ6 739 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 RASSF9O75901 435 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 DCTN2Q13561 401 aaKnown RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 TSHZ3Q63HK5 1081 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 SAMD9Q5K651 1589 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 PASKQ96RG2 1323 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 BCAS4Q8TDM0 211 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 SIKE1Q9BRV8 207 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 ATP8A2Q9NTI2 1148 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 PDE1BQ01064 536 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 CRYMQ14894 314 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 KARSQ15046 597 aaKnown RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 BSDC1Q9NW68 430 aaPredicted RBP10.51□□□□□ -0.73
COL12A1-201ENST00000322507 POLKQ9UBT6 870 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 MBD4O95243 580 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 TRAPPC3LQ5T215 181 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 NELFBQ8WX92 580 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 LRWD1Q9UFC0 647 aa10.51□□□□□ -0.73
COL12A1-201ENST00000322507 GPAA1O43292 621 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 ALDH1B1P30837 517 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 NDE1Q9NXR1 346 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 H0Y626 953 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 SRGAP2BP0DMP2 458 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 GARSP41250 739 aaKnown RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 RPS6KA2Q15349 733 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 RINT1Q6NUQ1 792 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TMC5Q6UXY8 1006 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 CHURC1Q8WUH1 139 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 AP1B1Q10567 949 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TEDDM1Q5T9Z0 273 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TEKT4Q8WW24 435 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 FOSL1P15407 271 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 HIBADHP31937 336 aaKnown RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 FAM212AQ96EL1 285 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 GGA1Q9UJY5 639 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 BIRC5O15392 142 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 SNX1Q13596 522 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 RUNDC3AQ59EK9 446 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TUBA3EQ6PEY2 450 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 KRT74Q7RTS7 529 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 C16orf71Q8IYS4 520 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 C8orf58Q8NAV2 365 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 OSBPL1AQ9BXW6 950 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 ARL2BPQ9Y2Y0 163 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 NACA2Q9H009 215 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 PARVAQ9NVD7 372 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 MED23Q9ULK4 1368 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 GCNT3O95395 438 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 DMP1Q13316 513 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 NFATC2IPQ8NCF5 419 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 NOD1Q9Y239 953 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 ZBED4O75132 1171 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 SPAG7O75391 227 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TBC1D8O95759 1140 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 HERC4Q5GLZ8 1057 aaPredicted RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 RNF169Q8NCN4 708 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 PPWD1Q96BP3 646 aaKnown RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 C1orf112Q9NSG2 853 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 PHLPP2Q6ZVD8 1323 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 DDAH1O94760 285 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 CTNNA1P35221 906 aaKnown RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 HSPA9P38646 679 aaKnown RBP10.5□□□□□ -0.73
COL12A1-201ENST00000322507 MAGEA1P43355 309 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 ZNF790Q6PG37 636 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 TEX12Q9BXU0 123 aa10.5□□□□□ -0.73
COL12A1-201ENST00000322507 EXOC3O60645 756 aa10.49□□□□□ -0.73
COL12A1-201ENST00000322507 EEF1GP26641 437 aaKnown RBP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 PABPC4Q13310 644 aaKnown RBP eCLIP10.49□□□□□ -0.73
COL12A1-201ENST00000322507 RABGGTAQ92696 567 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms