RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SEC31AO94979 1220 aaKnown RBP24.88■■□□□ 1.57
PNKP-201ENST00000322344 TUBBP07437 444 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 CTAGE8P0CG41 777 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 TERF2Q15554 542 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 KIAA1328Q86T90 577 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 CTAGE6Q86UF2 777 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 CTAGE4Q8IX94 777 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 NUDT12Q9BQG2 462 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 KANSL2Q9H9L4 492 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 NHEJ1Q9H9Q4 299 aaPredicted RBP24.88■■□□□ 1.57
PNKP-201ENST00000322344 PCDHA12Q9UN75 941 aa24.88■■□□□ 1.57
PNKP-201ENST00000322344 TBC1D8O95759 1140 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 IDEP14735 1019 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 CCDC122Q5T0U0 273 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 MCTP2Q6DN12 878 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 CCDC84Q86UT8 332 aaPredicted RBP24.87■■□□□ 1.57
PNKP-201ENST00000322344 HNRNPLLQ8WVV9 542 aaKnown RBP24.87■■□□□ 1.57
PNKP-201ENST00000322344 NDST4Q9H3R1 872 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 ZSWIM4Q9H7M6 989 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 BMP2KQ9NSY1 1161 aaPredicted RBP24.87■■□□□ 1.57
PNKP-201ENST00000322344 RAB21Q9UL25 225 aa24.87■■□□□ 1.57
PNKP-201ENST00000322344 NPM3O75607 178 aaKnown RBP24.86■■□□□ 1.57
PNKP-201ENST00000322344 KIF20AO95235 890 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 HNRNPH3P31942 346 aaKnown RBP24.86■■□□□ 1.57
PNKP-201ENST00000322344 HSPA1LP34931 641 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 USP11P51784 963 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 COL23A1Q86Y22 540 aaPredicted RBP24.86■■□□□ 1.57
PNKP-201ENST00000322344 FLAD1Q8NFF5 587 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 EEF2KMTQ96G04 330 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 IDI2Q9BXS1 227 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 PI4KBQ9UBF8 816 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 ADAMTSL1Q8N6G6 1762 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 KLK7P49862 253 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 KCNK18Q7Z418 384 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 JAKMIP2Q96AA8 810 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 DNAJC18Q9H819 358 aa24.86■■□□□ 1.57
PNKP-201ENST00000322344 MYH4Q9Y623 1939 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 QRICH1Q2TAL8 776 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 STRIP1Q5VSL9 837 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 MOXD1Q6UVY6 613 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 AKT1S1Q96B36 256 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 ANKZF1Q9H8Y5 726 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 SLC1A4P43007 532 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 CERKLQ49MI3 558 aaPredicted RBP24.85■■□□□ 1.57
PNKP-201ENST00000322344 SLFN13Q68D06 897 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 TRAPPC11Q7Z392 1133 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 MYOCDQ8IZQ8 938 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 TSGA10Q9BZW7 698 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 SIK3Q9Y2K2 1263 aa24.85■■□□□ 1.57
PNKP-201ENST00000322344 CYP3A7-CYP3A51PA0A087WV96 503 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 ERLIN1O75477 346 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 EEF2P13639 858 aaKnown RBP24.84■■□□□ 1.57
PNKP-201ENST00000322344 CYP3A7P24462 503 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 AP3B2Q13367 1082 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 LRRC55Q6ZSA7 311 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 ZFPM1Q8IX07 1006 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 DNAJC19Q96DA6 116 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 MBOAT7Q96N66 472 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 TRIM10Q9UDY6 481 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 PCDHA1Q9Y5I3 950 aa24.84■■□□□ 1.57
PNKP-201ENST00000322344 COL11A2P13942 1736 aaPredicted RBP24.84■■□□□ 1.57
PNKP-201ENST00000322344 COASYQ13057 564 aa24.83■■□□□ 1.57
PNKP-201ENST00000322344 TRIM34Q9BYJ4 488 aa24.83■■□□□ 1.57
PNKP-201ENST00000322344 EDEM3Q9BZQ6 932 aa24.83■■□□□ 1.57
PNKP-201ENST00000322344 UBXN6Q9BZV1 441 aa24.83■■□□□ 1.57
PNKP-201ENST00000322344 PLAGL2Q9UPG8 496 aa24.83■■□□□ 1.57
PNKP-201ENST00000322344 BRWD3Q6RI45 1802 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 CDC37Q16543 378 aaPredicted RBP24.83■■□□□ 1.56
PNKP-201ENST00000322344 ECM1Q16610 540 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 LONRF2Q1L5Z9 754 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 PAPD7Q5XG87 772 aaKnown RBP24.83■■□□□ 1.56
PNKP-201ENST00000322344 ARHGAP27Q6ZUM4 889 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 ANO3Q9BYT9 981 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 DBNDD1Q9H9R9 158 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 KCNMB3Q9NPA1 279 aa24.83■■□□□ 1.56
PNKP-201ENST00000322344 MMP10P09238 476 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 SPA17Q15506 151 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 TATDN1Q6P1N9 297 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 ZNF771Q7L3S4 317 aaPredicted RBP24.82■■□□□ 1.56
PNKP-201ENST00000322344 SLFN12Q8IYM2 578 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 CCDC42Q96M95 316 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 GBP3Q9H0R5 595 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 PANK4Q9NVE7 773 aa24.82■■□□□ 1.56
PNKP-201ENST00000322344 SASH3O75995 380 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 VAV2P52735 878 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 FAM26FQ5R3K3 315 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 TMEM179Q6ZVK1 233 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 CCDC65Q8IXS2 484 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 FUT8Q9BYC5 575 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 FAM198AQ9UFP1 575 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 ANO9A1A5B4 782 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 PLSCR1O15162 318 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 FKBP3Q00688 224 aaKnown RBP24.81■■□□□ 1.56
PNKP-201ENST00000322344 DACT2Q5SW24 774 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 KIAA0825Q8IV33 1275 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 PURBQ96QR8 312 aaKnown RBP24.81■■□□□ 1.56
PNKP-201ENST00000322344 SAR1BQ9Y6B6 198 aa24.81■■□□□ 1.56
PNKP-201ENST00000322344 DDTLA6NHG4 134 aaPredicted RBP24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L15C9J2P7 530 aa24.8■■□□□ 1.56
PNKP-201ENST00000322344 USP17L13C9JLJ4 530 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms