RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 STAT1P42224 750 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 TROAPQ12815 778 aa14□□□□□ -0.17
DNMT3A-202ENST00000321117 RNF10Q8N5U6 811 aaKnown RBP14□□□□□ -0.17
DNMT3A-202ENST00000321117 ORC4O43929 436 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 SEL1L2Q5TEA6 688 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 GIMAP8Q8ND71 665 aaPredicted RBP13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 CNTNAP5Q8WYK1 1306 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 DNAJC7Q99615 494 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 KCNK9Q9NPC2 374 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 BAIAP2L1Q9UHR4 511 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 LCMT1Q9UIC8 334 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 PCDHB13Q9Y5F0 798 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 TNS3Q68CZ2 1445 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 PGRMC1O00264 195 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 NAA25Q14CX7 972 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 TNIP1Q15025 636 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 DENND2CQ68D51 928 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 USP17L2Q6R6M4 530 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 TRMT1LQ7Z2T5 733 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 RSRC1Q96IZ7 334 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 PIGSQ96S52 555 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 ZNF804BA4D1E1 1349 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 TCRBV5S4A2TA0A5A2 114 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 EIF3HO15372 352 aaKnown RBP eCLIP13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 PRDX5P30044 214 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 PPP1R7Q15435 360 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 LACRTQ9GZZ8 138 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 CPVLQ9H3G5 476 aa13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 DDX25Q9UHL0 483 aaKnown RBP13.99□□□□□ -0.17
DNMT3A-202ENST00000321117 ABCB4P21439 1286 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 STK4Q13043 487 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PSMD2Q13200 908 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 EXOC3L4Q17RC7 722 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 EARS2Q5JPH6 523 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 NAA35Q5VZE5 725 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 GLT8D2Q9H1C3 349 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PLCB1Q9NQ66 1216 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PLAAQ9Y263 795 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 GCNT3O95395 438 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 KLK7P49862 253 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 ERFEQ4G0M1 354 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 KIAA1024Q9UPX6 916 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 FRMD4BQ9Y2L6 1034 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 BZW2Q9Y6E2 419 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 FAM170AA1A519 330 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 RGS16O15492 202 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 NR2F2P24468 414 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 STAG2Q8N3U4 1231 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 SH2D3CQ8N5H7 860 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 RUBCNQ92622 972 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 SH2D4AQ9H788 454 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PVALEFA0A1B0GWK0 134 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 A0A1W2PRG0 241 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 UFL1O94874 794 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 SEC23AQ15436 765 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PDXDC2PQ6P474 469 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 ADAT2Q7Z6V5 191 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 LRRC47Q8N1G4 583 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 HPS3Q969F9 1004 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 PAIP2Q9BPZ3 127 aaKnown RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 JPH2Q9BR39 696 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 CCDC77Q9BR77 488 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 BSDC1Q9NW68 430 aaPredicted RBP13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 CTTNBP2NLQ9P2B4 639 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 DUSP10Q9Y6W6 482 aa13.98□□□□□ -0.17
DNMT3A-202ENST00000321117 CLNS1AP54105 237 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 HERVK_113P62684 666 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 SLC20A2Q08357 652 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 ZRSR2Q15696 482 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 LRP10Q7Z4F1 713 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 MMGT1Q8N4V1 131 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 UBL4BQ8N7F7 174 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 PBKQ96KB5 322 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 SLC1A4P43007 532 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 SF3B2Q13435 895 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 PKN1Q16512 942 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 GUF1Q8N442 669 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 DDX12PQ92771 950 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 CDCA7Q9BWT1 371 aaPredicted RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 TMEM60Q9H2L4 133 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 BARHL2Q9NY43 387 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 SMARCAL1Q9NZC9 954 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 CEP72Q9P209 647 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 RTCBQ9Y3I0 505 aaKnown RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 SPOPO43791 374 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 CACNB1Q02641 598 aaPredicted RBP13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 PPP2R5EQ16537 467 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 GRIPAP1Q4V328 841 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 FAM83BQ5T0W9 1011 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 SH3RF1Q7Z6J0 888 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 EHMT1Q9H9B1 1298 aa13.97□□□□□ -0.17
DNMT3A-202ENST00000321117 GNPATO15228 680 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 GRM4Q14833 912 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 FOXR1Q6PIV2 292 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 COA7Q96BR5 231 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 PSTPIP2Q9H939 334 aa13.96□□□□□ -0.17
DNMT3A-202ENST00000321117 ANAPC4Q9UJX5 808 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms