RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 RAD54LQ92698 747 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 MLXIPQ9HAP2 919 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 TCP10Q12799 353 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 GPS2Q13227 327 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ENOX2Q16206 610 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 SHROOM1Q2M3G4 852 aaPredicted RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 NELFCDQ8IXH7 590 aa19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ZC3H12CQ9C0D7 883 aaKnown RBP19.36■□□□□ 0.69
COL9A1-201ENST00000320755 ESYT2A0FGR8 921 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 EIF3CLB5ME19 914 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 EIF4A3P38919 411 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 ZNF543Q08ER8 600 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 ERGIC2Q96RQ1 377 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 EIF3CQ99613 913 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 IFIH1Q9BYX4 1025 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 NLRC4Q9NPP4 1024 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 ARHGAP20Q9P2F6 1191 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 PNMA6FA0A0J9YX94 578 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 FXR2P51116 673 aaKnown RBP eCLIP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 MEX3CQ5U5Q3 659 aaKnown RBP19.35■□□□□ 0.69
COL9A1-201ENST00000320755 CERKQ8TCT0 537 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 CRACR2AQ9BSW2 395 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 PSTPIP2Q9H939 334 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 STK17AQ9UEE5 414 aa19.35■□□□□ 0.69
COL9A1-201ENST00000320755 MYH1P12882 1939 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 TRAF5O00463 557 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 SMARCA1P28370 1054 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 MATR3P43243 847 aaKnown RBP eCLIP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 HNRNPH2P55795 449 aaKnown RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 ZSCAN29Q8IWY8 852 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 GSPT2Q8IYD1 628 aaKnown RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 CCDC170Q8IYT3 715 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 SECISBP2LQ93073 1101 aaKnown RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 PCDHA12Q9UN75 941 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 NPHP3-ACAD11A0A0J9YXS1 232 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 LRRC53A6NM62 1247 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 PDE2AO00408 941 aaPredicted RBP19.34■□□□□ 0.69
COL9A1-201ENST00000320755 SNAP25P60880 206 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 NFIAQ12857 509 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 CACNA2D4Q7Z3S7 1137 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 ZFPM1Q8IX07 1006 aa19.34■□□□□ 0.69
COL9A1-201ENST00000320755 LRRIQ3A6PVS8 624 aaPredicted RBP19.33■□□□□ 0.69
COL9A1-201ENST00000320755 E9PMD0 336 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 MOCS3O95396 460 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 CXCR5P32302 372 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 GABPAQ06546 454 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 EHBP1Q8NDI1 1231 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 CUL5Q93034 780 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 FAN1Q9Y2M0 1017 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 PPEF1O14829 653 aaPredicted RBP19.33■□□□□ 0.69
COL9A1-201ENST00000320755 MAN2A1Q16706 1144 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 HAS1Q92839 578 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 KIAA1024Q9UPX6 916 aa19.33■□□□□ 0.69
COL9A1-201ENST00000320755 PVALEFA0A1B0GWK0 134 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 EIF3JO75822 258 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 PPP1R2P41236 205 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 DNA2P51530 1060 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 VAV2P52735 878 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 NAP1L1P55209 391 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 C2orf54Q08AI8 447 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 SEMA3FQ13275 785 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 CCDC40Q4G0X9 1142 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 PAPD7Q5XG87 772 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 GUF1Q8N442 669 aaKnown RBP19.33■□□□□ 0.68
COL9A1-201ENST00000320755 FGFBP2Q9BYJ0 223 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 RIC8AQ9NPQ8 531 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 SIK3Q9Y2K2 1263 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 PCDHA13Q9Y5I0 950 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 CAPN6Q9Y6Q1 641 aa19.33■□□□□ 0.68
COL9A1-201ENST00000320755 ZNF831Q5JPB2 1677 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 SHMT1P34896 483 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 KIF11P52732 1056 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 MRPL12P52815 198 aaKnown RBP19.32■□□□□ 0.68
COL9A1-201ENST00000320755 USP14P54578 494 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 TUBB4BP68371 445 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 APBA1Q02410 837 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 ARID5AQ03989 594 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
COL9A1-201ENST00000320755 GBP3Q9H0R5 595 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PLAGL2Q9UPG8 496 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PCDHAC2Q9Y5I4 1007 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PDIA5Q14554 519 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 TDRD12Q587J7 1177 aaKnown RBP19.32■□□□□ 0.68
COL9A1-201ENST00000320755 HSP90B2PQ58FF3 399 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 SEPT12Q8IYM1 358 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 TSG101Q99816 390 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 KCNQ5Q9NR82 932 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PANK4Q9NVE7 773 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 SMARCAL1Q9NZC9 954 aa19.32■□□□□ 0.68
COL9A1-201ENST00000320755 USO1O60763 962 aaKnown RBP19.31■□□□□ 0.68
COL9A1-201ENST00000320755 STAT3P40763 770 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 RBM5P52756 815 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL9A1-201ENST00000320755 MYOCDQ8IZQ8 938 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 POLD4Q9HCU8 107 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 MYH10P35580 1976 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 COASYQ13057 564 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 CDC42EP5Q6NZY7 148 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 CDK5RAP2Q96SN8 1893 aa19.31■□□□□ 0.68
COL9A1-201ENST00000320755 FAM193AP78312 1265 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms