RNA–Protein interactions for RNA: ENST00000320516.4

CCDC65-202, Transcript of coiled-coil domain containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC65, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-202ENST00000320516 CENPBP07199 599 aaPredicted RBP11.47□□□□□ -0.57
CCDC65-202ENST00000320516 CPA1P15085 419 aa11.47□□□□□ -0.57
CCDC65-202ENST00000320516 ARHGAP1Q07960 439 aa11.47□□□□□ -0.57
CCDC65-202ENST00000320516 LY6KQ17RY6 165 aa11.47□□□□□ -0.57
CCDC65-202ENST00000320516 FBXL16Q8N461 479 aa11.47□□□□□ -0.57
CCDC65-202ENST00000320516 SEZ6LQ9BYH1 1024 aa11.47□□□□□ -0.57
CCDC65-202ENST00000320516 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
CCDC65-202ENST00000320516 POLR3EQ9NVU0 708 aa11.47□□□□□ -0.57
CCDC65-202ENST00000320516 SEC63Q9UGP8 760 aaKnown RBP11.47□□□□□ -0.57
CCDC65-202ENST00000320516 MEIS2O14770 477 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 RCAN1P53805 252 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 PSMC6P62333 389 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 SYNE3Q6ZMZ3 975 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 FCHSD1Q86WN1 690 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 LRCH3Q96II8 777 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 JAKMIP1Q96N16 626 aaKnown RBP11.46□□□□□ -0.57
CCDC65-202ENST00000320516 RBM28Q9NW13 759 aaKnown RBP11.46□□□□□ -0.57
CCDC65-202ENST00000320516 CNTNAP5Q8WYK1 1306 aa11.46□□□□□ -0.57
CCDC65-202ENST00000320516 SCN10AQ9Y5Y9 1956 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 hCG_1642624A0A1W2PR95 340 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 ZBTB43O43298 467 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 TIMP1P01033 207 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 GH1P01241 217 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 MYL3P08590 195 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 MYCLP12524 364 aaPredicted RBP11.46□□□□□ -0.58
CCDC65-202ENST00000320516 RAG1P15918 1043 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 EPHB4P54760 987 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 RTN1Q16799 776 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 USP17L6PQ6QN14 398 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 CCDC82Q8N4S0 544 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 AFG1LQ8WV93 481 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 EMID1Q96A84 441 aaPredicted RBP11.46□□□□□ -0.58
CCDC65-202ENST00000320516 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.58
CCDC65-202ENST00000320516 AGXT2Q9BYV1 514 aa11.46□□□□□ -0.58
CCDC65-202ENST00000320516 LAMA2P24043 3122 aaKnown RBP11.45□□□□□ -0.58
CCDC65-202ENST00000320516 KLF18A0A0U1RQI7 1052 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 B4GALT4O60513 344 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 KPNA6O60684 536 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 MMP3P08254 477 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 RPS6KB1P23443 525 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 CDC27P30260 824 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 MRPS9P82933 396 aaKnown RBP11.45□□□□□ -0.58
CCDC65-202ENST00000320516 BRDTQ58F21 947 aaPredicted RBP11.45□□□□□ -0.58
CCDC65-202ENST00000320516 C9orf50Q5SZB4 431 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 BLOC1S2Q6QNY1 142 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 Q6ZUG5 572 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 USP26Q9BXU7 913 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 MRVI1Q9Y6F6 885 aa11.45□□□□□ -0.58
CCDC65-202ENST00000320516 NID2Q14112 1375 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 TLR3O15455 904 aaKnown RBP11.44□□□□□ -0.58
CCDC65-202ENST00000320516 TGFB3P10600 412 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 CCND2P30279 289 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 SP2Q02086 613 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 SHHQ15465 462 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 MFSD5Q6N075 450 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 TYW1BQ6NUM6 668 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 KCNV1Q6PIU1 500 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 GPKOWQ92917 476 aaPredicted RBP eCLIP11.44□□□□□ -0.58
CCDC65-202ENST00000320516 ZFP91Q96JP5 570 aaPredicted RBP11.44□□□□□ -0.58
CCDC65-202ENST00000320516 INPP4AQ96PE3 977 aaPredicted RBP11.44□□□□□ -0.58
CCDC65-202ENST00000320516 TRPV6Q9H1D0 765 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 ALDH8A1Q9H2A2 487 aaPredicted RBP11.44□□□□□ -0.58
CCDC65-202ENST00000320516 PSTPIP2Q9H939 334 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 GOLGA8AA7E2F4 631 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 GOLGA8BA8MQT2 603 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 STAM2O75886 525 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 HOXD8P13378 290 aaPredicted RBP11.44□□□□□ -0.58
CCDC65-202ENST00000320516 PSMA5P28066 241 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 ICAM3P32942 547 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 APOBRQ0VD83 1088 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 LAMC2Q13753 1193 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 NBPF20Q3BBV1 942 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 MYSM1Q5VVJ2 828 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 WWC2Q6AWC2 1192 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 GPR153Q6NV75 609 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 SMARCC2Q8TAQ2 1214 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 KAT2BQ92831 832 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 BRF1Q92994 677 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 CUL5Q93034 780 aa11.44□□□□□ -0.58
CCDC65-202ENST00000320516 CASTP20810 708 aaKnown RBP11.43□□□□□ -0.58
CCDC65-202ENST00000320516 UBA1P22314 1058 aaKnown RBP11.43□□□□□ -0.58
CCDC65-202ENST00000320516 ADD1P35611 737 aaKnown RBP11.43□□□□□ -0.58
CCDC65-202ENST00000320516 EVCP57679 992 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 FPGSQ05932 587 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 CELF3Q5SZQ8 465 aaKnown RBP11.43□□□□□ -0.58
CCDC65-202ENST00000320516 PCNX4Q63HM2 1172 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 NFRKBQ6P4R8 1299 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 HEATR3Q7Z4Q2 680 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 PPTC7Q8NI37 304 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 PPP1R12CQ9BZL4 782 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 ZSWIM6Q9HCJ5 1215 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 TRMT13Q9NUP7 481 aaKnown RBP11.43□□□□□ -0.58
CCDC65-202ENST00000320516 V9GY48 417 aaPredicted RBP11.43□□□□□ -0.58
CCDC65-202ENST00000320516 UMODL1Q5DID0 1318 aa11.43□□□□□ -0.58
CCDC65-202ENST00000320516 SPATA31C2B4DYI2 1134 aa11.42□□□□□ -0.58
CCDC65-202ENST00000320516 METAP2P50579 478 aaKnown RBP eCLIP11.42□□□□□ -0.58
CCDC65-202ENST00000320516 FGD1P98174 961 aa11.42□□□□□ -0.58
CCDC65-202ENST00000320516 PTPN11Q06124 597 aaPredicted RBP11.42□□□□□ -0.58
CCDC65-202ENST00000320516 DGKDQ16760 1214 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms