RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 LONP1P36776 959 aaKnown RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PPP2R5AQ15172 486 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 ZCRB1Q8TBF4 217 aaKnown RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 TBC1D31Q96DN5 1066 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 ZNF512BQ96KM6 892 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 NOX5Q96PH1 765 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 CDCA7Q9BWT1 371 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 SPATA31A1Q5TZJ5 1347 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 CCDC194A0A1B0GVG4 234 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 WTIPA6NIX2 430 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 GNAT2P19087 354 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 CCNE1P24864 410 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 ITGB3BPQ13352 177 aaPredicted RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 RETREG2Q8NC44 543 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 PYM1Q9BRP8 204 aaKnown RBP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.67□□□□□ -0.7
PTPRA-202ENST00000318266 VEZTQ9HBM0 779 aa10.67□□□□□ -0.7
PTPRA-202ENST00000318266 MAGEB6P1A0A0J9YX57 407 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 RAD51CO43502 376 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 RHOBTB3O94955 611 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 PAX7P23759 505 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 SMTNP53814 917 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 DDR1Q08345 913 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 SNCBQ16143 134 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 CYB5D1Q6P9G0 228 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 RPAINQ86UA6 219 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 OSBPL7Q9BZF2 842 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 DDX20Q9UHI6 824 aaKnown RBP10.66□□□□□ -0.7
PTPRA-202ENST00000318266 MCM8Q9UJA3 840 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 ASAP1Q9ULH1 1129 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 SKAP2O75563 359 aaPredicted RBP10.66□□□□□ -0.7
PTPRA-202ENST00000318266 RASSF9O75901 435 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 DYMQ7RTS9 669 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 PARP9Q8IXQ6 854 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 BLIDQ8IZY5 108 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 NDST4Q9H3R1 872 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 ADAMTS7Q9UKP4 1686 aa10.66□□□□□ -0.7
PTPRA-202ENST00000318266 A6NNZ2 444 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 PHF20L1A8MW92 1017 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 USP17L12C9JPN9 530 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 USP17L21D6R901 530 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 PLSCR1O15162 318 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 NEBLO76041 1014 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 PDE6BP35913 854 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 TUBB8Q3ZCM7 444 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 CHADLQ6NUI6 762 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 SPATS2Q86XZ4 545 aaKnown RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 C4orf32Q8N8J7 132 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 UBLCP1Q8WVY7 318 aaPredicted RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 PLA2G12BQ9BX93 195 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 RBM28Q9NW13 759 aaKnown RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 BICDL2A1A5D9 508 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 DCDC2CA8MYV0 355 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 GCOM1H8Y6P7 765 aaPredicted RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 MYZAPP0CAP1 466 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 CTNNA1P35221 906 aaKnown RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 CLNS1AP54105 237 aaKnown RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 ITIH3Q06033 890 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 PREPLQ4J6C6 727 aaPredicted RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 FAM228AQ86W67 206 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 FAM114A1Q8IWE2 563 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 DHTKD1Q96HY7 919 aaPredicted RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 AP1M1Q9BXS5 423 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 GDF3Q9NR23 364 aa10.65□□□□□ -0.7
PTPRA-202ENST00000318266 TPX2Q9ULW0 747 aaKnown RBP10.65□□□□□ -0.7
PTPRA-202ENST00000318266 PRLRP16471 622 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 KCNB1Q14721 858 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 LRRC41Q15345 812 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 TXNRD1Q16881 649 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 VWA3BQ502W6 1294 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 FUKQ8N0W3 1084 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 ERGIC2Q96RQ1 377 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 PACSIN1Q9BY11 444 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 TRIM9Q9C026 710 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 SEMA6BQ9H3T3 888 aa10.65□□□□□ -0.71
PTPRA-202ENST00000318266 MYH6P13533 1939 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 GMNCA6NCL1 334 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 HMGB1P1B2RPK0 211 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 FGFR2P21802 821 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 KLRC1P26715 233 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 HSD17B3P37058 310 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 NAA25Q14CX7 972 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 ARL6IP4Q66PJ3 421 aaKnown RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 ZNF572Q7Z3I7 529 aaPredicted RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 HEATR3Q7Z4Q2 680 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 CABP7Q86V35 215 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 CCDC47Q96A33 483 aaKnown RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 MIEF2Q96C03 454 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 CPVLQ9H3G5 476 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 KBTBD4Q9NVX7 518 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 BAIAP2L1Q9UHR4 511 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 NOVA2Q9UNW9 492 aaKnown RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 PNPLA7Q6ZV29 1317 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 KCNK3O14649 394 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 TRAPPC10P48553 1259 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 RCAN1P53805 252 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 TRIM28Q13263 835 aaKnown RBP10.64□□□□□ -0.71
PTPRA-202ENST00000318266 PPP2R5BQ15173 497 aa10.64□□□□□ -0.71
PTPRA-202ENST00000318266 LETM2Q2VYF4 491 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms