RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 LDHCP07864 332 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 FXR2P51116 673 aaKnown RBP eCLIP15.32■□□□□ 0.04
MKS1-201ENST00000313863 HSPA2P54652 639 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 SLC9C1Q4G0N8 1177 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 NFRKBQ6P4R8 1299 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 REXO1Q8N1G1 1221 aaKnown RBP15.32■□□□□ 0.04
MKS1-201ENST00000313863 WDR66Q8TBY9 1149 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 BCAS4Q8TDM0 211 aa15.32■□□□□ 0.04
MKS1-201ENST00000313863 SMCR8Q8TEV9 937 aaPredicted RBP15.32■□□□□ 0.04
MKS1-201ENST00000313863 LARP4BQ92615 738 aaKnown RBP15.32■□□□□ 0.04
MKS1-201ENST00000313863 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
MKS1-201ENST00000313863 ATAD5Q96QE3 1844 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 RBAK-RBAKDNI3L0D1 243 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 LDHBP07195 334 aaKnown RBP15.31■□□□□ 0.04
MKS1-201ENST00000313863 CCT5P48643 541 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 PDIA5Q14554 519 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 PACS2Q86VP3 889 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.31■□□□□ 0.04
MKS1-201ENST00000313863 CEP72Q9P209 647 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 STX8Q9UNK0 236 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 THRAP3Q9Y2W1 955 aaKnown RBP15.31■□□□□ 0.04
MKS1-201ENST00000313863 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 WTIPA6NIX2 430 aaPredicted RBP15.31■□□□□ 0.04
MKS1-201ENST00000313863 MATR3P43243 847 aaKnown RBP eCLIP15.31■□□□□ 0.04
MKS1-201ENST00000313863 CALCRLQ16602 461 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 C3orf67Q6ZVT6 689 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 BAP1Q92560 729 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 EEF2KMTQ96G04 330 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 NLRP3Q96P20 1036 aa15.31■□□□□ 0.04
MKS1-201ENST00000313863 MMTAG2Q9BU76 263 aaKnown RBP15.31■□□□□ 0.04
MKS1-201ENST00000313863 COL16A1Q07092 1604 aaPredicted RBP15.3■□□□□ 0.04
MKS1-201ENST00000313863 GNA14O95837 355 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 SERPING1P05155 500 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 NAP1L1P55209 391 aaKnown RBP15.3■□□□□ 0.04
MKS1-201ENST00000313863 PPP4CP60510 307 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 DDB1Q16531 1140 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 SLC35G1Q2M3R5 365 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 ASTE1Q2TB18 679 aaPredicted RBP15.3■□□□□ 0.04
MKS1-201ENST00000313863 CFAP58Q5T655 872 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 MREGQ8N565 214 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 C1orf131Q8NDD1 294 aaKnown RBP15.3■□□□□ 0.04
MKS1-201ENST00000313863 HDAC7Q8WUI4 952 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 TLR10Q9BXR5 811 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 PLEKHA4Q9H4M7 779 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 TFCP2L1Q9NZI6 479 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 FAM169AQ9Y6X4 670 aa15.3■□□□□ 0.04
MKS1-201ENST00000313863 ERLIN2O94905 339 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 USP8P40818 1118 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 GRB10Q13322 594 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 EZH2Q15910 746 aaKnown RBP15.29■□□□□ 0.04
MKS1-201ENST00000313863 TDRD12Q587J7 1177 aaKnown RBP15.29■□□□□ 0.04
MKS1-201ENST00000313863 SFMBT2Q5VUG0 894 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 KRT79Q5XKE5 535 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 MICALCLQ6ZW33 695 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 MICALL1Q8N3F8 863 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 TBCKQ8TEA7 893 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 WHAMMQ8TF30 809 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 DYNLL2Q96FJ2 89 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 TANGO6Q9C0B7 1094 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 MYMKA6NI61 221 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 ZEB2O60315 1214 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 KLRK1P26718 216 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 TXKP42681 527 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 GTF2A1P52655 376 aaPredicted RBP15.29■□□□□ 0.04
MKS1-201ENST00000313863 SLC7A5Q01650 507 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 KLHDC7AQ5VTJ3 777 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 SUGP1Q8IWZ8 645 aaKnown RBP15.29■□□□□ 0.04
MKS1-201ENST00000313863 CD302Q8IX05 232 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 RAD54LQ92698 747 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 CEP63Q96MT8 703 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 MTMR9Q96QG7 549 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 GDF3Q9NR23 364 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 BLOC1S4Q9NUP1 217 aa15.29■□□□□ 0.04
MKS1-201ENST00000313863 GRIN2DO15399 1336 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 EPHB6O15197 1021 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 RASA1P20936 1047 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 FKBP3Q00688 224 aaKnown RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 RASSF7Q02833 373 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 MMS22LQ6ZRQ5 1243 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 LRRC55Q6ZSA7 311 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 MYOCDQ8IZQ8 938 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 EIF1ADQ8N9N8 165 aaKnown RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 RBM12Q9NTZ6 932 aaKnown RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 COL4A3BPQ9Y5P4 624 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 CDK5RAP2Q96SN8 1893 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 ZNF335Q9H4Z2 1342 aaPredicted RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 CES2O00748 559 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 KIAA0754O94854 1291 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 CXCR5P32302 372 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 TNNC1P63316 161 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 CCDC40Q4G0X9 1142 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 EMC10Q5UCC4 262 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 KDM7AQ6ZMT4 941 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 TSEN2Q8NCE0 465 aaKnown RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 NEDD1Q8NHV4 660 aa15.28■□□□□ 0.04
MKS1-201ENST00000313863 BMP2KQ9NSY1 1161 aaPredicted RBP15.28■□□□□ 0.04
MKS1-201ENST00000313863 MTMR7Q9Y216 660 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms