RNA–Protein interactions for RNA: ENST00000312756.4

GFM1-202, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 2

Gene GFM1, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-202ENST00000312756 PRPHP41219 470 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 SNAP25P60880 206 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 PSMD2Q13200 908 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 RBBP5Q15291 538 aaKnown RBP8.66□□□□□ -1.02
GFM1-202ENST00000312756 PKN1Q16512 942 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 TMEM164Q5U3C3 297 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 NAIF1Q69YI7 327 aaPredicted RBP8.66□□□□□ -1.02
GFM1-202ENST00000312756 C10orf67Q8IYJ2 551 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 BHMTQ93088 406 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 CDCA5Q96FF9 252 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 CRACR2AQ9BSW2 395 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 ZNF408Q9H9D4 720 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 A1CFQ9NQ94 594 aaKnown RBP8.66□□□□□ -1.02
GFM1-202ENST00000312756 TMOD4Q9NZQ9 345 aa8.66□□□□□ -1.02
GFM1-202ENST00000312756 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.66□□□□□ -1.02
GFM1-202ENST00000312756 V9GY48 417 aaPredicted RBP8.66□□□□□ -1.02
GFM1-202ENST00000312756 PHIPQ8WWQ0 1821 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 ERICH4A6NGS2 130 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 KLRF2D3W0D1 207 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 F5H6K3 240 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 TPPPO94811 219 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 FMNL1O95466 1100 aaPredicted RBP8.65□□□□□ -1.02
GFM1-202ENST00000312756 NDUFB10O96000 172 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 CCDC175P0C221 793 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 VCAM1P19320 739 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 KLRC3Q07444 240 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 SSRP1Q08945 709 aaKnown RBP8.65□□□□□ -1.02
GFM1-202ENST00000312756 KCNV1Q6PIU1 500 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 SRLQ86TD4 932 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 PNMA8AQ86V59 439 aaPredicted RBP8.65□□□□□ -1.02
GFM1-202ENST00000312756 HOMER1Q86YM7 354 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 KLRG1Q96E93 195 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 ALG1Q9BT22 464 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 ZNF341Q9BYN7 854 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 NYAP2Q9P242 653 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 KCNJ14Q9UNX9 436 aa8.65□□□□□ -1.02
GFM1-202ENST00000312756 PAPPA2Q9BXP8 1791 aa8.65□□□□□ -1.03
GFM1-202ENST00000312756 PARP1P09874 1014 aaKnown RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 CALM1P0DP23 149 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 CALM2P0DP24 149 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 CALM3P0DP25 149 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 SNHG28P0DPA3 235 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 TBC1D8BQ0IIM8 1120 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 SLFN13Q68D06 897 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 SYT10Q6XYQ8 523 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 CCDC186Q7Z3E2 898 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 GAS2L3Q86XJ1 694 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 IQUBQ8NA54 791 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 GPKOWQ92917 476 aaPredicted RBP eCLIP8.64□□□□□ -1.03
GFM1-202ENST00000312756 CLMNQ96JQ2 1002 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 VPS54Q9P1Q0 977 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 BICDL2A1A5D9 508 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 KIF28PB7ZC32 967 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 ZSCAN22P10073 491 aaPredicted RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 C7P10643 843 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 ERCC5P28715 1186 aaPredicted RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 ZNF543Q08ER8 600 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 DCAF15Q66K64 600 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 TYW1BQ6NUM6 668 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 CCDC73Q6ZRK6 1079 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 NOP9Q86U38 636 aaKnown RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 MYLK4Q86YV6 388 aaPredicted RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 KIF18AQ8NI77 898 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 RBM46Q8TBY0 533 aaKnown RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 HDAC7Q8WUI4 952 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 C8orf76Q96K31 380 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 PIGSQ96S52 555 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 TRIM7Q9C029 511 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 SPATS2LQ9NUQ6 558 aaKnown RBP8.64□□□□□ -1.03
GFM1-202ENST00000312756 ZNF112Q9UJU3 913 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 ZMIZ1Q9ULJ6 1067 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 SMCHD1A6NHR9 2005 aa8.64□□□□□ -1.03
GFM1-202ENST00000312756 CFAP69A5D8W1 941 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 TRIM75PA6NK02 468 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 H3BQV1 296 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 CTNND1O60716 968 aaKnown RBP8.63□□□□□ -1.03
GFM1-202ENST00000312756 F13A1P00488 732 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 ASNSP08243 561 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 KCNA2P16389 499 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 STIP1P31948 543 aaKnown RBP8.63□□□□□ -1.03
GFM1-202ENST00000312756 SLC1A4P43007 532 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 RCAN1P53805 252 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 NUCB2P80303 420 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 VGLL4Q14135 290 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 FAM83BQ5T0W9 1011 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 IFFO2Q5TF58 517 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 HHATQ5VTY9 493 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 KRT40Q6A162 431 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 MCTP1Q6DN14 999 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 CPLX2Q6PUV4 134 aaKnown RBP8.63□□□□□ -1.03
GFM1-202ENST00000312756 PACS2Q86VP3 889 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 LDHDQ86WU2 507 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 SCYL3Q8IZE3 742 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.63□□□□□ -1.03
GFM1-202ENST00000312756 ZNF483Q8TF39 744 aaPredicted RBP8.63□□□□□ -1.03
GFM1-202ENST00000312756 STK32AQ8WU08 396 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 PPM1EQ8WY54 764 aa8.63□□□□□ -1.03
GFM1-202ENST00000312756 THOC1Q96FV9 657 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms