RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 LRRC4BQ9NT99 713 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 SALL4Q9UJQ4 1053 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 PCDHA13Q9Y5I0 950 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 NCK2O43639 380 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 MATR3P43243 847 aaKnown RBP eCLIP23.16■■□□□ 1.3
RELA-201ENST00000308639 KIF11P52732 1056 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 RAD51AP2Q09MP3 1159 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 SPA17Q15506 151 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 HDAC7Q8WUI4 952 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 PURBQ96QR8 312 aaKnown RBP23.16■■□□□ 1.3
RELA-201ENST00000308639 GBP3Q9H0R5 595 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 TSPYL1Q9H0U9 437 aa23.16■■□□□ 1.3
RELA-201ENST00000308639 IL1R1P14778 569 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 TMC4Q7Z404 712 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 RAD54LQ92698 747 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 TANGO6Q9C0B7 1094 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 PLAGL2Q9UPG8 496 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
RELA-201ENST00000308639 TUBB4BP68371 445 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 VPS72Q15906 364 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 FOXR1Q6PIV2 292 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 DEF6Q9H4E7 631 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 NLRC4Q9NPP4 1024 aa23.15■■□□□ 1.3
RELA-201ENST00000308639 NFRKBQ6P4R8 1299 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 LRRC55Q6ZSA7 311 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 TBC1D16Q8TBP0 767 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 RAD21O60216 631 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 FXR2P51116 673 aaKnown RBP eCLIP23.14■■□□□ 1.29
RELA-201ENST00000308639 GFPT1Q06210 699 aaPredicted RBP23.14■■□□□ 1.29
RELA-201ENST00000308639 KCTD1Q719H9 257 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 ADGRF4Q8IZF3 695 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 EHBP1Q8NDI1 1231 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 TRIM34Q9BYJ4 488 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 JMJD4Q9H9V9 463 aa23.14■■□□□ 1.29
RELA-201ENST00000308639 NPHP3-ACAD11A0A0J9YXS1 232 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 A0A1W2PQJ5 194 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 AKR1B10O60218 316 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 TMEM266Q2M3C6 531 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 SHROOM1Q2M3G4 852 aaPredicted RBP23.13■■□□□ 1.29
RELA-201ENST00000308639 HSP90B2PQ58FF3 399 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 SYF2O95926 243 aaKnown RBP23.13■■□□□ 1.29
RELA-201ENST00000308639 MAN2A1Q16706 1144 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 ZNF662Q6ZS27 426 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 HAS1Q92839 578 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 SH2D4AQ9H788 454 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 FAM204AQ9H8W3 233 aa23.13■■□□□ 1.29
RELA-201ENST00000308639 ESYT2A0FGR8 921 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 NT5C2P49902 561 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 FIGNQ5HY92 759 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 KRT79Q5XKE5 535 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 AEBP2Q6ZN18 517 aaPredicted RBP23.12■■□□□ 1.29
RELA-201ENST00000308639 CREG2Q8IUH2 290 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 NELFCDQ8IXH7 590 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 CRACR2AQ9BSW2 395 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 LCMT1Q9UIC8 334 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 HPCAL4Q9UM19 191 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 BUB1O43683 1085 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 ATP2B4P23634 1241 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 SCNN1DP51172 638 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 SLC7A5Q01650 507 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 C15orf52Q6ZUT6 534 aaKnown RBP23.12■■□□□ 1.29
RELA-201ENST00000308639 BAP1Q92560 729 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 STK17AQ9UEE5 414 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 GAKO14976 1311 aa23.12■■□□□ 1.29
RELA-201ENST00000308639 USP17L10C9JJH3 530 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 RNF40O75150 1001 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 PLCG2P16885 1265 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 DNA2P51530 1060 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 CKAP4Q07065 602 aaKnown RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 KCNMA1Q12791 1236 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 SEMA3FQ13275 785 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 PAXIP1Q6ZW49 1069 aaPredicted RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 GUF1Q8N442 669 aaKnown RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 PLEKHA4Q9H4M7 779 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 SNX12Q9UMY4 172 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 E9PMD0 336 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 NOVP48745 357 aa23.11■■□□□ 1.29
RELA-201ENST00000308639 ENOX2Q16206 610 aaKnown RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 DDX25Q9UHL0 483 aaKnown RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 DMGDHQ9UI17 866 aaKnown RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 ZC3H4Q9UPT8 1303 aaKnown RBP23.11■■□□□ 1.29
RELA-201ENST00000308639 TAF1LQ8IZX4 1826 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 PVALEFA0A1B0GWK0 134 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 SERPINB2P05120 415 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 RASSF7Q02833 373 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 COASYQ13057 564 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 FAM71BQ8TC56 605 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 LRRC1Q9BTT6 524 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 FAM196BA6NMK8 535 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 MPHOSPH10O00566 681 aaKnown RBP23.1■■□□□ 1.29
RELA-201ENST00000308639 MARCH6O60337 910 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 SLC1A4P43007 532 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 CDK17Q00537 523 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 DNAJC19Q96DA6 116 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 PSD3Q9NYI0 1048 aa23.1■■□□□ 1.29
RELA-201ENST00000308639 ANO9A1A5B4 782 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 MYH7BA7E2Y1 1941 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L15C9J2P7 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L13C9JLJ4 530 aa23.09■■□□□ 1.29
RELA-201ENST00000308639 USP17L11C9JVI0 530 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms