RNA–Protein interactions for RNA: ENST00000307712.10

SEC23A-201, Transcript of Sec23 homolog A, coat complex II component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC23A, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-201ENST00000307712 ARHGAP44Q17R89 818 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 GLE1Q53GS7 698 aaKnown RBP14.77□□□□□ -0.04
SEC23A-201ENST00000307712 STXBP4Q6ZWJ1 553 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 USP17L1Q7RTZ2 530 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 RPAINQ86UA6 219 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 SLF2Q8IX21 1173 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 CUL5Q93034 780 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 EYA3Q99504 573 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 LZTS2Q9BRK4 669 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 CCDC87Q9NVE4 849 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 PCDHA12Q9UN75 941 aa14.77□□□□□ -0.04
SEC23A-201ENST00000307712 LAD1O00515 517 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 XRCC5P13010 732 aaKnown RBP14.77□□□□□ -0.05
SEC23A-201ENST00000307712 SLC8A1P32418 973 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 RCAN1P53805 252 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 STK4Q13043 487 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 GALNT17Q6IS24 598 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 CCDC105Q8IYK2 499 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 FBF1Q8TES7 1133 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 IFT74Q96LB3 600 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 CCDC77Q9BR77 488 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 PLVAPQ9BX97 442 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 COL4A3BPQ9Y5P4 624 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 FRMPD2Q68DX3 1309 aaPredicted RBP14.77□□□□□ -0.05
SEC23A-201ENST00000307712 SEL1L2Q5TEA6 688 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 NT5DC1Q5TFE4 455 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 PIGBQ92521 554 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 CCT8L2Q96SF2 557 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 CD2APQ9Y5K6 639 aa14.77□□□□□ -0.05
SEC23A-201ENST00000307712 PXDNQ92626 1479 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 SERPING1P05155 500 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 PLTPP55058 493 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 HERVK_113P62684 666 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 EARS2Q5JPH6 523 aaKnown RBP14.76□□□□□ -0.05
SEC23A-201ENST00000307712 PROCA1Q8NCQ7 364 aaPredicted RBP14.76□□□□□ -0.05
SEC23A-201ENST00000307712 ATP6V1G3Q96LB4 118 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 ATP8A2Q9NTI2 1148 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 GNA14O95837 355 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 LSP1P33241 339 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 PEX19P40855 299 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 STAT1P42224 750 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 INTS9Q9NV88 658 aaKnown RBP14.76□□□□□ -0.05
SEC23A-201ENST00000307712 NKIRAS1Q9NYS0 192 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 TRIM28Q13263 835 aaKnown RBP14.76□□□□□ -0.05
SEC23A-201ENST00000307712 LLGL1Q15334 1064 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 FAM133BQ5BKY9 247 aaKnown RBP14.76□□□□□ -0.05
SEC23A-201ENST00000307712 MTA3Q9BTC8 594 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 DDX47Q9H0S4 455 aaKnown RBP14.76□□□□□ -0.05
SEC23A-201ENST00000307712 ATP6V0A2Q9Y487 856 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 CAPN6Q9Y6Q1 641 aa14.76□□□□□ -0.05
SEC23A-201ENST00000307712 GCNT3O95395 438 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 SLCO1A2P46721 670 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 ATP11AP98196 1134 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 SUSD4Q5VX71 490 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 USP17L2Q6R6M4 530 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 INTS8Q75QN2 995 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 VSIG1Q86XK7 387 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 KSR1Q8IVT5 923 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 HDAC7Q8WUI4 952 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 RPGRQ92834 1020 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 ANKRD2Q9GZV1 360 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 CXorf56Q9H5V9 222 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.051e-13■■■■■ 224.2
SEC23A-201ENST00000307712 PLEKHG2Q9H7P9 1386 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 FAM237AA0A1B0GTK4 181 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 GMNCA6NCL1 334 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 GCKP35557 465 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 RPS8P62241 208 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 EXOC3L4Q17RC7 722 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 PAPD7Q5XG87 772 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 RDH13Q8NBN7 331 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 MRRFQ96E11 262 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 ACTR5Q9H9F9 607 aaPredicted RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 KLC4Q9NSK0 619 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 ASIC3Q9UHC3 531 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 KIAA1024Q9UPX6 916 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 CLTCQ00610 1675 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 NR2F2P24468 414 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 PCK1P35558 622 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 SETDB1Q15047 1291 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 ZNF473Q8WTR7 871 aaKnown RBP14.75□□□□□ -0.05
SEC23A-201ENST00000307712 SH2D4AQ9H788 454 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 PLCB1Q9NQ66 1216 aa14.75□□□□□ -0.05
SEC23A-201ENST00000307712 SPDYE3A6NKU9 549 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 CSF1RP07333 972 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 MAGOHP61326 146 aaKnown RBP14.74□□□□□ -0.05
SEC23A-201ENST00000307712 FAM83BQ5T0W9 1011 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 TAOK1Q7L7X3 1001 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 MAGOHBQ96A72 148 aaKnown RBP14.74□□□□□ -0.05
SEC23A-201ENST00000307712 RNPC3Q96LT9 517 aaKnown RBP14.74□□□□□ -0.05
SEC23A-201ENST00000307712 CCDC169A6NNP5 214 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 KCNB1Q14721 858 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 OR2W6PQ8NHA6 318 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 TRIM9Q9C026 710 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 EPN3Q9H201 632 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 RIC8AQ9NPQ8 531 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 FAM53CQ9NYF3 392 aa14.74□□□□□ -0.05
SEC23A-201ENST00000307712 RIMS1Q86UR5 1692 aaKnown RBP14.74□□□□□ -0.05
SEC23A-201ENST00000307712 ALKBH5Q6P6C2 394 aaKnown RBP14.74□□□□□ -0.05
SEC23A-201ENST00000307712 TBC1D1Q86TI0 1168 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms