RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NLRP4Q96MN2 994 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 CLIC6Q96NY7 704 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 RGPD8O14715 1765 aaPredicted RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 ADCY5O95622 1261 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 RGS2P41220 211 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 KIAA1841Q6NSI8 718 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 OR6J1Q8NGC5 347 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 MAGEF1Q9HAY2 307 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 BARHL2Q9NY43 387 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 ERCC3P19447 782 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 YWHAEP62258 255 aaKnown RBP10.24□□□□□ -0.77
PTPRE-202ENST00000306042 TCP11Q8WWU5 503 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 RNF34Q969K3 372 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 SPZ1Q9BXG8 430 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 CUEDC2Q9H467 287 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 CLIC4Q9Y696 253 aa10.24□□□□□ -0.77
PTPRE-202ENST00000306042 DYNC1LI2O43237 492 aaPredicted RBP10.23□□□□□ -0.77
PTPRE-202ENST00000306042 SRGAP2CP0DJJ0 459 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 RARBP10826 455 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 PTGS1P23219 599 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 PAFAH1B1P43034 410 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CATSPER4Q7RTX7 472 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CCDC42Q96M95 316 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 LUC7L2Q9Y383 392 aaKnown RBP10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CXCL11O14625 94 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CMA1P23946 247 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 ABCD1P33897 745 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 SLC39A14Q15043 492 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 FKBP1CQ5VVH2 108 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 ZC3H15Q8WU90 426 aaKnown RBP10.23□□□□□ -0.77
PTPRE-202ENST00000306042 MMS19Q96T76 1030 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CSRNP2Q9H175 543 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 EHD4Q9H223 541 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CLSTN2Q9H4D0 955 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 ABCC6O95255 1503 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 GAP43P17677 238 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CTTNQ14247 550 aaKnown RBP10.23□□□□□ -0.77
PTPRE-202ENST00000306042 HSP90B2PQ58FF3 399 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 ACER1Q8TDN7 264 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 CPA4Q9UI42 421 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 MRC1P22897 1456 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 SFNP31947 248 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 NELFBQ8WX92 580 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 FAM20AQ96MK3 541 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 VPS16Q9H269 839 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 ZNF302Q9NR11 478 aa10.23□□□□□ -0.77
PTPRE-202ENST00000306042 STK36Q9NRP7 1315 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 MYOM1P52179 1685 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 CA12O43570 354 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 TRPA1O75762 1119 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 DLATP10515 647 aaKnown RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 PDHBP11177 359 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 GJC1P36383 396 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 SKIDA1Q1XH10 827 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 PLEKHH3Q7Z736 793 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 GTPBP6O43824 516 aaPredicted RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 CSPG5O95196 566 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 TFRCP02786 760 aaKnown RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 MAPK4P31152 587 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 TOB2Q14106 344 aaPredicted RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 C15orf52Q6ZUT6 534 aaKnown RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 LRRC45Q96CN5 670 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 STK17AQ9UEE5 414 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 PCDHA7Q9UN72 937 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 KIF28PB7ZC32 967 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 IPO5O00410 1097 aaKnown RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 GNA14O95837 355 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 PRELPP51888 382 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 MAP2K1Q02750 393 aaPredicted RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 PROM2Q8N271 834 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 CCDC127Q96BQ5 260 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 RIOK1Q9BRS2 568 aaKnown RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 NEFHP12036 1026 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 XRCC5P13010 732 aaKnown RBP10.22□□□□□ -0.77
PTPRE-202ENST00000306042 PNOCQ13519 176 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 GJA10Q969M2 543 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 SLC39A2Q9NP94 309 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 DISC1Q9NRI5 854 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 TMEM260Q9NX78 707 aa10.22□□□□□ -0.77
PTPRE-202ENST00000306042 AK9Q5TCS8 1911 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 LTN1O94822 1766 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 PDHXO00330 501 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 BCRP11274 1271 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 PRPHP41219 470 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 LUZP1Q86V48 1076 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 RIC8AQ9NPQ8 531 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 KIF2AO00139 706 aaPredicted RBP10.21□□□□□ -0.77
PTPRE-202ENST00000306042 LARGE1O95461 756 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 NR3C2P08235 984 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 CDC27P30260 824 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 INHBEP58166 350 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 VWA3BQ502W6 1294 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 SWSAP1Q6NVH7 229 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 CCDC112Q8NEF3 446 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 MICAL1Q8TDZ2 1067 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 IDI2Q9BXS1 227 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 EFCC1Q9HA90 598 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
PTPRE-202ENST00000306042 PPP6R2O75170 966 aa10.21□□□□□ -0.78
PTPRE-202ENST00000306042 APOBEC3HQ6NTF7 200 aaKnown RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms