RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 KCTD1Q719H9 257 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 FBXO18Q8NFZ0 1043 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 KCNG4Q8TDN1 519 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 C8orf76Q96K31 380 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 RNPC3Q96LT9 517 aaKnown RBP8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 AGBL1Q96MI9 1066 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 CDX2Q99626 313 aaPredicted RBP8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 DNAJC25Q9H1X3 360 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 SEMA6BQ9H3T3 888 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 TOMM22Q9NS69 142 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 POLR3EQ9NVU0 708 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 STX8Q9UNK0 236 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 MYH1P12882 1939 aa8.93□□□□□ -0.98
TM4SF1-201ENST00000305366 SYNRGQ9UMZ2 1314 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 IGKV6D-41A0A0C4DH26 115 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 KLF18A0A0U1RQI7 1052 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 NMT2O60551 498 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 CHRM1P11229 460 aaPredicted RBP8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 ALAS1P13196 640 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 PTGS1P23219 599 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 SLC1A4P43007 532 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 BEX3Q00994 111 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 ALX1Q15699 326 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 CCDC144BQ3MJ40 725 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 GNASQ5JWF2 1037 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 DNTTIP2Q5QJE6 756 aaKnown RBP8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 EEPD1Q7L9B9 569 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 CHST3Q7LGC8 479 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 FSIP1Q8NA03 581 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 SPC24Q8NBT2 197 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 LINC00301Q8NCQ3 95 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 NUP133Q8WUM0 1156 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 MYLIPQ8WY64 445 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 MRPS27Q92552 414 aaKnown RBP8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 MRFAP1L1Q96HT8 127 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 TRIM5Q9C035 493 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 FTOQ9C0B1 505 aaKnown RBP eCLIP8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 SLC38A10Q9HBR0 1119 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 ANO10Q9NW15 660 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 NRBP1Q9UHY1 535 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 PYCARDQ9ULZ3 195 aa8.92□□□□□ -0.98
TM4SF1-201ENST00000305366 TSPY2A6NKD2 308 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 GOLGA8BA8MQT2 603 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 RANBP6O60518 1105 aaKnown RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 ADAMTS4O75173 837 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 ME1P48163 572 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 HAND2P61296 217 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CEBPZQ03701 1054 aaKnown RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 FPGSQ05932 587 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 FAAP100Q0VG06 881 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 SNX17Q15036 470 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 GLIPR1L2Q4G1C9 344 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 RRP12Q5JTH9 1297 aaKnown RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 ARMCX2Q7L311 632 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 RASGRP2Q7LDG7 609 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CCDC144CPQ8IYA2 1237 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 FMR1NBQ8N0W7 255 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 NEDD1Q8NHV4 660 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 MKL1Q969V6 931 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 TMEM87BQ96K49 555 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 SPC25Q9HBM1 224 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 GPHNQ9NQX3 736 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 ORC3Q9UBD5 711 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 NAP1L2Q9ULW6 460 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 PCDHA7Q9UN72 937 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 A0A0C4DFX4 3053 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 DNAJC25-GNG10A0A024R161 153 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 GOLGA6L19H0YKK7 550 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 ADCY6O43306 1168 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 NEMFO60524 1076 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CDKL5O76039 1030 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 ASGR1P07306 291 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 STAT2P52630 851 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 FOSBP53539 338 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 TRDNQ13061 729 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CCDC96Q2M329 555 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 MYSM1Q5VVJ2 828 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 FAM109BQ6ICB4 259 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 C11orf57Q6ZUT1 292 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CCDC186Q7Z3E2 898 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CCDC82Q8N4S0 544 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 GMCL1P1Q8NEA9 526 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CHST13Q8NET6 341 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 GLT1D1Q96MS3 346 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 TRERF1Q96PN7 1200 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 PURBQ96QR8 312 aaKnown RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 PPP1R12CQ9BZL4 782 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 TTYH1Q9H313 450 aaPredicted RBP8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 RNF146Q9NTX7 359 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 FBXO40Q9UH90 709 aa8.91□□□□□ -0.98
TM4SF1-201ENST00000305366 CDK5RAP2Q96SN8 1893 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 SYNGAP1Q96PV0 1343 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 COL6A3P12111 3177 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 GRXCR1A8MXD5 290 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 SH2B2O14492 632 aaPredicted RBP8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 CPLX1O14810 134 aa8.9□□□□□ -0.98
TM4SF1-201ENST00000305366 KIAA0355O15063 1070 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms