RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 GRIN2DO15399 1336 aa30.51■■■□□ 2.48
CDKN2A-201ENST00000304494 CCND2P30279 289 aa30.51■■■□□ 2.47
CDKN2A-201ENST00000304494 FPGSQ05932 587 aa30.51■■■□□ 2.47
CDKN2A-201ENST00000304494 KCNV1Q6PIU1 500 aa30.51■■■□□ 2.47
CDKN2A-201ENST00000304494 VSIG10LQ86VR7 867 aa30.51■■■□□ 2.47
CDKN2A-201ENST00000304494 LRCH3Q96II8 777 aa30.51■■■□□ 2.47
CDKN2A-201ENST00000304494 MRVI1Q9Y6F6 885 aa30.51■■■□□ 2.47
CDKN2A-201ENST00000304494 ZBTB43O43298 467 aa30.5■■■□□ 2.47
CDKN2A-201ENST00000304494 FGD1P98174 961 aa30.5■■■□□ 2.47
CDKN2A-201ENST00000304494 GPR153Q6NV75 609 aa30.5■■■□□ 2.47
CDKN2A-201ENST00000304494 DDX41Q9UJV9 622 aaKnown RBP30.5■■■□□ 2.47
CDKN2A-201ENST00000304494 EPB41L2O43491 1005 aaKnown RBP30.49■■■□□ 2.47
CDKN2A-201ENST00000304494 CCDC82Q8N4S0 544 aa30.49■■■□□ 2.47
CDKN2A-201ENST00000304494 SMARCC2Q8TAQ2 1214 aa30.49■■■□□ 2.47
CDKN2A-201ENST00000304494 JAKMIP1Q96N16 626 aaKnown RBP30.49■■■□□ 2.47
CDKN2A-201ENST00000304494 SNX14Q9Y5W7 946 aa30.49■■■□□ 2.47
CDKN2A-201ENST00000304494 KIAA1217Q5T5P2 1943 aa30.49■■■□□ 2.47
CDKN2A-201ENST00000304494 PIK3CDO00329 1044 aa30.48■■■□□ 2.47
CDKN2A-201ENST00000304494 RCAN1P53805 252 aa30.48■■■□□ 2.47
CDKN2A-201ENST00000304494 ARHGAP1Q07960 439 aa30.48■■■□□ 2.47
CDKN2A-201ENST00000304494 EMID1Q96A84 441 aaPredicted RBP30.48■■■□□ 2.47
CDKN2A-201ENST00000304494 BRPF3Q9ULD4 1205 aa30.48■■■□□ 2.47
CDKN2A-201ENST00000304494 FRMPD4Q14CM0 1322 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 KLF18A0A0U1RQI7 1052 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 SHHQ15465 462 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 RTN1Q16799 776 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 MFSD5Q6N075 450 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 BLOC1S2Q6QNY1 142 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 IL31RAQ8NI17 732 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 AFG1LQ8WV93 481 aa30.47■■■□□ 2.47
CDKN2A-201ENST00000304494 B4GALT4O60513 344 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 STAM2O75886 525 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 RGS20O76081 388 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 MMP3P08254 477 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 TGFB3P10600 412 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 LAMC2Q13753 1193 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 TMEM199Q8N511 208 aa30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 ALDH8A1Q9H2A2 487 aaPredicted RBP30.46■■■□□ 2.47
CDKN2A-201ENST00000304494 SUPT20HL2P0C7V6 817 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 PSMA5P28066 241 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 GNPTABQ3T906 1256 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 C9orf50Q5SZB4 431 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 NFRKBQ6P4R8 1299 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 DHX37Q8IY37 1157 aaKnown RBP30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 TRPV6Q9H1D0 765 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 PSTPIP2Q9H939 334 aa30.45■■■□□ 2.47
CDKN2A-201ENST00000304494 GOLGA8AA7E2F4 631 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 GOLGA8BA8MQT2 603 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 MEIS2O14770 477 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 CASTP20810 708 aaKnown RBP30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 DGKDQ16760 1214 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 USP17L6PQ6QN14 398 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 PPP1R12CQ9BZL4 782 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 HIPK3Q9H422 1215 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 CNTNAP5Q8WYK1 1306 aa30.44■■■□□ 2.46
CDKN2A-201ENST00000304494 hCG_1642624A0A1W2PR95 340 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 CPA1P15085 419 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 PTPN11Q06124 597 aaPredicted RBP30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 PPIGQ13427 754 aaKnown RBP eCLIP30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 NBPF20Q3BBV1 942 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 XRRA1Q6P2D8 792 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 Q6ZUG5 572 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 HEATR3Q7Z4Q2 680 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 PPTC7Q8NI37 304 aa30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 NAP1L2Q9ULW6 460 aaPredicted RBP30.43■■■□□ 2.46
CDKN2A-201ENST00000304494 EPHB4P54760 987 aa30.42■■■□□ 2.46
CDKN2A-201ENST00000304494 FAM47CQ5HY64 1035 aa30.42■■■□□ 2.46
CDKN2A-201ENST00000304494 CCDC196A0A1B0GTZ2 297 aa30.41■■■□□ 2.46
CDKN2A-201ENST00000304494 RPS6KB1P23443 525 aa30.41■■■□□ 2.46
CDKN2A-201ENST00000304494 PCNX4Q63HM2 1172 aa30.41■■■□□ 2.46
CDKN2A-201ENST00000304494 FBXL16Q8N461 479 aa30.41■■■□□ 2.46
CDKN2A-201ENST00000304494 CYP2C18P33260 490 aa30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 METAP2P50579 478 aaKnown RBP eCLIP30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 MRPS9P82933 396 aaKnown RBP30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 CELF3Q5SZQ8 465 aaKnown RBP30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 MYSM1Q5VVJ2 828 aa30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 BRF1Q92994 677 aa30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 RNPC3Q96LT9 517 aaKnown RBP30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 INPP4AQ96PE3 977 aaPredicted RBP30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 TRMT13Q9NUP7 481 aaKnown RBP30.4■■■□□ 2.46
CDKN2A-201ENST00000304494 SCN10AQ9Y5Y9 1956 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 hCG_1984214I3L0E3 225 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 GGPS1O95749 300 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 CSF2RAP15509 400 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 UBA1P22314 1058 aaKnown RBP30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 APOBRQ0VD83 1088 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 FUT2Q10981 343 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 TEX2Q8IWB9 1127 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 ZNF713Q8N859 430 aaPredicted RBP30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 GPKOWQ92917 476 aaPredicted RBP eCLIP30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 ZFP91Q96JP5 570 aaPredicted RBP30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 NOC4LQ9BVI4 516 aaKnown RBP30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 KATNAL1Q9BW62 490 aa30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 V9GY48 417 aaPredicted RBP30.39■■■□□ 2.46
CDKN2A-201ENST00000304494 ICAM3P32942 547 aa30.38■■■□□ 2.45
CDKN2A-201ENST00000304494 CHMP4BP1P59074 171 aa30.38■■■□□ 2.45
CDKN2A-201ENST00000304494 PPP1R18Q6NYC8 613 aa30.38■■■□□ 2.45
CDKN2A-201ENST00000304494 SPATA33Q96N06 139 aa30.38■■■□□ 2.45
CDKN2A-201ENST00000304494 MLXIPQ9HAP2 919 aa30.38■■■□□ 2.45
CDKN2A-201ENST00000304494 FAM217BQ9NTX9 383 aaPredicted RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms