RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 CHP1Q99653 195 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 RNF26Q9BY78 433 aaPredicted RBP13.12□□□□□ -0.31
APLF-201ENST00000303795 CD248Q9HCU0 757 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 GJA3Q9Y6H8 435 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 MST1RQ04912 1400 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 MAGEA1P43355 309 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 GRIK3Q13003 919 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 MKRN4PQ13434 485 aaPredicted RBP13.12□□□□□ -0.31
APLF-201ENST00000303795 KRT31Q15323 416 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 RESP18Q5W5W9 173 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 DNAAF5Q86Y56 855 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 SLF2Q8IX21 1173 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 RNF217Q8TC41 542 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 MRRFQ96E11 262 aaKnown RBP13.12□□□□□ -0.31
APLF-201ENST00000303795 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
APLF-201ENST00000303795 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
APLF-201ENST00000303795 PPP6R2O75170 966 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
APLF-201ENST00000303795 GCKP35557 465 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 PRCPP42785 496 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 ADCY7P51828 1080 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 BIRC2Q13490 618 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 TATDN2Q93075 761 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 BAIAP2L1Q9UHR4 511 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 PPP1R12AO14974 1030 aaPredicted RBP13.11□□□□□ -0.31
APLF-201ENST00000303795 FERMT2Q96AC1 680 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 TUBGCP2Q9BSJ2 902 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 SRPRBQ9Y5M8 271 aaKnown RBP13.11□□□□□ -0.31
APLF-201ENST00000303795 GLI3P10071 1580 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 PHRF1Q9P1Y6 1649 aaKnown RBP13.11□□□□□ -0.31
APLF-201ENST00000303795 OPA1O60313 960 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 PTPAQ15257 358 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 IQCEQ6IPM2 695 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 PCDHA12Q9UN75 941 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
APLF-201ENST00000303795 CDK8P49336 464 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 SARSP49591 514 aaKnown RBP13.1□□□□□ -0.31
APLF-201ENST00000303795 TOB1P50616 345 aaPredicted RBP13.1□□□□□ -0.31
APLF-201ENST00000303795 CYP2J2P51589 502 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 NSMFQ6X4W1 530 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 B4GALNT4Q76KP1 1039 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 CCDC25Q86WR0 208 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 OGFOD1Q8N543 542 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 EPN1Q9Y6I3 576 aaPredicted RBP13.1□□□□□ -0.31
APLF-201ENST00000303795 CAMTA1Q9Y6Y1 1673 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 E7EVH7 732 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 CAMTA2O94983 1202 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 KLK7P49862 253 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 MAP3K14Q99558 947 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 PSTPIP2Q9H939 334 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 ARPP21Q9UBL0 812 aaPredicted RBP13.1□□□□□ -0.31
APLF-201ENST00000303795 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.1□□□□□ -0.31
APLF-201ENST00000303795 TNS3Q68CZ2 1445 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 ALS2Q96Q42 1657 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 A0A1B0GUA9 196 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 TDP2O95551 362 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 OR52Z1P0C646 297 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 POLR2FP61218 127 aaKnown RBP13.1□□□□□ -0.31
APLF-201ENST00000303795 RASSF7Q02833 373 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 TXNRD1Q16881 649 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 OR8K1Q8NGG5 319 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
APLF-201ENST00000303795 TJP1Q07157 1748 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 KLHL33A6NCF5 533 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 EIF4E1BA6NMX2 242 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 ERVV-1B6SEH8 477 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 FOXP2O15409 715 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 TACC1O75410 805 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 GCNT3O95395 438 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 NEDD9Q14511 834 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 GRIK5Q16478 980 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 NBPF20Q3BBV1 942 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 CFAP58Q5T655 872 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 C6orf89Q6UWU4 347 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 CYP26C1Q6V0L0 522 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 PNMA8AQ86V59 439 aaPredicted RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 CNOT6LQ96LI5 555 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 REXO2Q9Y3B8 237 aaKnown RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 LRP6O75581 1613 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 WNT7AO00755 349 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 LTN1O94822 1766 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 KIF4AO95239 1232 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 STAT3P40763 770 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 FXR1P51114 621 aaKnown RBP eCLIP13.09□□□□□ -0.31
APLF-201ENST00000303795 IFFO1Q0D2I5 559 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 WHAMMP3Q1A5X7 153 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 GPBP1Q86WP2 473 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 ELOA2Q8IYF1 753 aaPredicted RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 SPATA20Q8TB22 786 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 ALS2CR12Q96Q35 445 aa13.09□□□□□ -0.31
APLF-201ENST00000303795 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
APLF-201ENST00000303795 SKOR1P84550 965 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms