RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CLIC2O15247 247 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 LRRN2O75325 713 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 NRBP2Q9NSY0 501 aa15.18■□□□□ 0.02
PRKCB-201ENST00000303531 SEPT9Q9UHD8 586 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-201ENST00000303531 H7C0C1 242 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 BAG2O95816 211 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 MYL1P05976 194 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 ATP5OP48047 213 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 YWHAGP61981 247 aaKnown RBP eCLIP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 ZNF653Q96CK0 615 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 STK17AQ9UEE5 414 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 PRPF3O43395 683 aaKnown RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 MAP7Q14244 749 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 ERFEQ4G0M1 354 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 NCAPG2Q86XI2 1143 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 SCYL1Q96KG9 808 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 DAAM1Q9Y4D1 1078 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 GCFC2P16383 781 aaKnown RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 PDZD4Q76G19 769 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 NHEJ1Q9H9Q4 299 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 DISC1Q9NRI5 854 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 EFCAB6Q5THR3 1501 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 FTCDO95954 541 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 SESN3P58005 492 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 RINT1Q6NUQ1 792 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 COA7Q96BR5 231 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 FAN1Q9Y2M0 1017 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 GADL1Q6ZQY3 521 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 SESTD1Q86VW0 696 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 PAGE5Q96GU1 130 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 PNMA2Q9UL42 364 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 PGRMC1O00264 195 aaKnown RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 MEIS1O00470 390 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 PPEF1O14829 653 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 CSRNP1Q96S65 589 aa15.17■□□□□ 0.02
PRKCB-201ENST00000303531 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-201ENST00000303531 SGK1O00141 431 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 KIF3CO14782 793 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 NLRP10Q86W26 655 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 SAT1P21673 171 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 IGBP1P78318 339 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 CYP2D7A0A087X1C5 515 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 MAPK4P31152 587 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 GBP5Q96PP8 586 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 SPTLC3Q9NUV7 552 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.16■□□□□ 0.02
PRKCB-201ENST00000303531 CD2APQ9Y5K6 639 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 SYNJ2BP-COX16A0A087WUM0 186 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 THAP9Q9H5L6 903 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 COX16Q9P0S2 106 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 ATP8A1Q9Y2Q0 1164 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 LMNB2Q03252 620 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 ITKQ08881 620 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 FAM160B1Q5W0V3 765 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 CFAP61Q8NHU2 1237 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 PLCG1P19174 1290 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 EIF4A3P38919 411 aaKnown RBP15.16■□□□□ 0.02
PRKCB-201ENST00000303531 IRX4P78413 519 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 IFRD2Q12894 506 aaPredicted RBP15.16■□□□□ 0.02
PRKCB-201ENST00000303531 RFX6Q8HWS3 928 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 GCNT4Q9P109 453 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 MBD5Q9P267 1494 aa15.16■□□□□ 0.02
PRKCB-201ENST00000303531 SUN1O94901 812 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 PLTPP55058 493 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 SNX1Q13596 522 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 SLC17A8Q8NDX2 589 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 PIH1D3Q9NQM4 214 aaKnown RBP15.15■□□□□ 0.02
PRKCB-201ENST00000303531 hCG_1984214I3L0E3 225 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 GFPT2O94808 682 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 IFT88Q13099 833 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 ZNF713Q8N859 430 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-201ENST00000303531 ACCSQ96QU6 501 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 PARD6BQ9BYG5 372 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 PCIF1Q9H4Z3 704 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 USP17L8P0C7I0 530 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 ZBED6P86452 979 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 IL9RQ01113 521 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 BCS1LQ9Y276 419 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 CLRN2A0PK11 232 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 ATP1A3P13637 1013 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 CCNE1P24864 410 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 SLC8A1P32418 973 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 CUL4BQ13620 913 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 CCDC197Q8NCU1 140 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 DYNLL2Q96FJ2 89 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 A6NJR5 290 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 NDUFA10O95299 355 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 GDF11O95390 407 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 EAPPQ56P03 285 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-201ENST00000303531 GBP7Q8N8V2 638 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-201ENST00000303531 ATP6V0A1Q93050 837 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 ZNF277Q9NRM2 450 aaPredicted RBP15.15■□□□□ 0.02
PRKCB-201ENST00000303531 PTCH1Q13635 1447 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 INHBAP08476 426 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 LIFRP42702 1097 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 KIF11P52732 1056 aa15.15■□□□□ 0.02
PRKCB-201ENST00000303531 MAP7D3Q8IWC1 876 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms