RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 TROAPQ12815 778 aa15.52■□□□□ 0.08
SDC2-201ENST00000302190 GPBP1Q86WP2 473 aa15.52■□□□□ 0.08
SDC2-201ENST00000302190 CCDC65Q8IXS2 484 aa15.52■□□□□ 0.08
SDC2-201ENST00000302190 GJC1P36383 396 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 PABPC4Q13310 644 aaKnown RBP eCLIP15.52■□□□□ 0.07
SDC2-201ENST00000302190 PRR16Q569H4 304 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 NFRKBQ6P4R8 1299 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 CCDC84Q86UT8 332 aaPredicted RBP15.52■□□□□ 0.07
SDC2-201ENST00000302190 GGA1Q9UJY5 639 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 PPP1R3GB7ZBB8 358 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 UBXN2AP68543 259 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 ARHGAP44Q17R89 818 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 SFMBT2Q5VUG0 894 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 MYOCDQ8IZQ8 938 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 SPICE1Q8N0Z3 855 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 TRIM58Q8NG06 486 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 LARP4BQ92615 738 aaKnown RBP15.52■□□□□ 0.07
SDC2-201ENST00000302190 KRT12Q99456 494 aa15.52■□□□□ 0.07
SDC2-201ENST00000302190 CETN3O15182 167 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 PLEKP08567 350 aaPredicted RBP15.51■□□□□ 0.07
SDC2-201ENST00000302190 CUL5Q93034 780 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 PLA2G12BQ9BX93 195 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 XDHP47989 1333 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 MMP10P09238 476 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 ANKRD40Q6AI12 368 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 TXNRD3Q86VQ6 643 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 POTEDQ86YR6 584 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 KIAA0825Q8IV33 1275 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 CCDC155Q8N6L0 562 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 TBC1D5Q92609 795 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 LCMT1Q9UIC8 334 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 N4BP2Q86UW6 1770 aaPredicted RBP15.51■□□□□ 0.07
SDC2-201ENST00000302190 LGALS16A8MUM7 142 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 CCNE1P24864 410 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 EEF1GP26641 437 aaKnown RBP15.51■□□□□ 0.07
SDC2-201ENST00000302190 FAM26FQ5R3K3 315 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 PRR5LQ6MZQ0 368 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 FAM133AQ8N9E0 248 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 SELENOSQ9BQE4 189 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 DPH5Q9H2P9 285 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 EPB41L5Q9HCM4 733 aa15.51■□□□□ 0.07
SDC2-201ENST00000302190 USP17L5A8MUK1 530 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 GCNT3O95395 438 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 TUBBP07437 444 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 TRAPPC10P48553 1259 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 KIF11P52732 1056 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 GFPT1Q06210 699 aaPredicted RBP15.5■□□□□ 0.07
SDC2-201ENST00000302190 SF3B2Q13435 895 aaKnown RBP15.5■□□□□ 0.07
SDC2-201ENST00000302190 GOLGA5Q8TBA6 731 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 NSUN4Q96CB9 384 aaKnown RBP15.5■□□□□ 0.07
SDC2-201ENST00000302190 NDST4Q9H3R1 872 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 BSDC1Q9NW68 430 aaPredicted RBP15.5■□□□□ 0.07
SDC2-201ENST00000302190 GSTTP1A0A1W2PQM5 241 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 TCRBV5S4A2TA0A5A2 114 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 SFI1A8K8P3 1242 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 TDP2O95551 362 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 TSGA10Q9BZW7 698 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 H3BQF6 201 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 GGCXP38435 758 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 ASIC2Q16515 512 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 CFAP221Q4G0U5 840 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 RC3H1Q5TC82 1133 aaKnown RBP15.5■□□□□ 0.07
SDC2-201ENST00000302190 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 PANK4Q9NVE7 773 aa15.5■□□□□ 0.07
SDC2-201ENST00000302190 CLIC2O15247 247 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 FAM13AO94988 1023 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 CFBP00751 764 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 GUCY2CP25092 1073 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 ADAM9Q13443 819 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 TUBB2AQ13885 445 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 CEP85LQ5SZL2 805 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 FAM71BQ8TC56 605 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 TUBB2BQ9BVA1 445 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 BRIP1Q9BX63 1249 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 PSTPIP2Q9H939 334 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 TUBGCP6Q96RT7 1819 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 PMS1P54277 932 aaKnown RBP15.49■□□□□ 0.07
SDC2-201ENST00000302190 ZBED6P86452 979 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 CLEC4GQ6UXB4 293 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 LRRC27Q9C0I9 530 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 USP40Q9NVE5 1235 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 DDX25Q9UHL0 483 aaKnown RBP15.49■□□□□ 0.07
SDC2-201ENST00000302190 BCS1LQ9Y276 419 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 PKN1Q16512 942 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 FUT8Q9BYC5 575 aa15.49■□□□□ 0.07
SDC2-201ENST00000302190 LRRC53A6NM62 1247 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 ZBTB7AO95365 584 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 CDK8P49336 464 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 PSEN1P49768 467 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 MMP14P50281 582 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 TUBB4BP68371 445 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 DAAM2Q86T65 1068 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 ERMNQ8TAM6 284 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 EXOC4Q96A65 974 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 CEP95Q96GE4 821 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 SELENOOQ9BVL4 669 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 LACRTQ9GZZ8 138 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 HYOU1Q9Y4L1 999 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 PCNTO95613 3336 aa15.48■□□□□ 0.07
SDC2-201ENST00000302190 PNPLA7Q6ZV29 1317 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms