RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 SCRN1Q12765 414 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 FSCN1Q16658 493 aaKnown RBP20.95■□□□□ 0.94
SPSB3-201ENST00000301717 CCDC62Q6P9F0 684 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 CXCL17Q6UXB2 119 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 SLC39A5Q6ZMH5 540 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 SAMD3Q8N6K7 520 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 OR6J1Q8NGC5 347 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 KIF2CQ99661 725 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 SPC25Q9HBM1 224 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 TMEM260Q9NX78 707 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 RTEL1Q9NZ71 1219 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 ATP11BQ9Y2G3 1177 aa20.95■□□□□ 0.94
SPSB3-201ENST00000301717 FRMPD4Q14CM0 1322 aa20.94■□□□□ 0.94
SPSB3-201ENST00000301717 EIF3JO75822 258 aaKnown RBP20.94■□□□□ 0.94
SPSB3-201ENST00000301717 CCND2P30279 289 aa20.94■□□□□ 0.94
SPSB3-201ENST00000301717 TTLL4Q14679 1199 aa20.94■□□□□ 0.94
SPSB3-201ENST00000301717 TRIM60Q495X7 471 aa20.94■□□□□ 0.94
SPSB3-201ENST00000301717 PRPF38BQ5VTL8 546 aaKnown RBP20.94■□□□□ 0.94
SPSB3-201ENST00000301717 NECAB1Q8N987 351 aa20.94■□□□□ 0.94
SPSB3-201ENST00000301717 PPP1R13LQ8WUF5 828 aa20.94■□□□□ 0.94
SPSB3-201ENST00000301717 SMCO2A6NFE2 343 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 EIF5BO60841 1220 aaKnown RBP20.93■□□□□ 0.94
SPSB3-201ENST00000301717 AIFM3Q96NN9 605 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 C22orf23Q9BZE7 217 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 ALDH8A1Q9H2A2 487 aaPredicted RBP20.93■□□□□ 0.94
SPSB3-201ENST00000301717 BCAS3Q9H6U6 928 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 PCDHA6Q9UN73 950 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 PCDHA8Q9Y5H6 950 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 MRVI1Q9Y6F6 885 aa20.93■□□□□ 0.94
SPSB3-201ENST00000301717 ADCY7P51828 1080 aa20.92■□□□□ 0.94
SPSB3-201ENST00000301717 NKX3-2P78367 333 aa20.92■□□□□ 0.94
SPSB3-201ENST00000301717 PPP1R18Q6NYC8 613 aa20.92■□□□□ 0.94
SPSB3-201ENST00000301717 TSEN34Q9BSV6 310 aaKnown RBP20.92■□□□□ 0.94
SPSB3-201ENST00000301717 RNF26Q9BY78 433 aaPredicted RBP20.92■□□□□ 0.94
SPSB3-201ENST00000301717 SLKQ9H2G2 1235 aaPredicted RBP20.92■□□□□ 0.94
SPSB3-201ENST00000301717 RIC8AQ9NPQ8 531 aa20.92■□□□□ 0.94
SPSB3-201ENST00000301717 STARD7Q9NQZ5 370 aa20.92■□□□□ 0.94
SPSB3-201ENST00000301717 VPS54Q9P1Q0 977 aa20.92■□□□□ 0.94
SPSB3-201ENST00000301717 MOXD2PA6NHM9 499 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 CPLX1O14810 134 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 PFKFB2O60825 505 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 PSMC6P62333 389 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 AKAP17AQ02040 695 aaKnown RBP20.91■□□□□ 0.94
SPSB3-201ENST00000301717 SP2Q02086 613 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 ARHGAP1Q07960 439 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 ME3Q16798 604 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 PCSK9Q8NBP7 692 aaKnown RBP20.91■□□□□ 0.94
SPSB3-201ENST00000301717 VTI1AQ96AJ9 217 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 DDX41Q9UJV9 622 aaKnown RBP20.91■□□□□ 0.94
SPSB3-201ENST00000301717 Q9Y3F1 56 aa20.91■□□□□ 0.94
SPSB3-201ENST00000301717 SSRP1Q08945 709 aaKnown RBP20.9■□□□□ 0.94
SPSB3-201ENST00000301717 SEMA3FQ13275 785 aa20.9■□□□□ 0.94
SPSB3-201ENST00000301717 SNX17Q15036 470 aa20.9■□□□□ 0.94
SPSB3-201ENST00000301717 RASGRP4Q8TDF6 673 aa20.9■□□□□ 0.94
SPSB3-201ENST00000301717 NR2E3Q9Y5X4 410 aa20.9■□□□□ 0.94
SPSB3-201ENST00000301717 SPDYE3A6NKU9 549 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 hCG_1984214I3L0E3 225 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 CTDNEP1O95476 244 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 MYL3P08590 195 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 TLE2Q04725 743 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 JAKMIP3Q5VZ66 844 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 ZNF713Q8N859 430 aaPredicted RBP20.89■□□□□ 0.94
SPSB3-201ENST00000301717 AFG1LQ8WV93 481 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 GLT1D1Q96MS3 346 aa20.89■□□□□ 0.94
SPSB3-201ENST00000301717 NKRFO15226 690 aaKnown RBP eCLIP20.88■□□□□ 0.93
SPSB3-201ENST00000301717 PQBP1O60828 265 aaKnown RBP20.88■□□□□ 0.93
SPSB3-201ENST00000301717 GH1P01241 217 aa20.88■□□□□ 0.93
SPSB3-201ENST00000301717 UBA1P22314 1058 aaKnown RBP20.88■□□□□ 0.93
SPSB3-201ENST00000301717 ST3GAL1Q11201 340 aa20.88■□□□□ 0.93
SPSB3-201ENST00000301717 ANKRD1Q15327 319 aa20.88■□□□□ 0.93
SPSB3-201ENST00000301717 PCNX4Q63HM2 1172 aa20.88■□□□□ 0.93
SPSB3-201ENST00000301717 INPP4AQ96PE3 977 aaPredicted RBP20.88■□□□□ 0.93
SPSB3-201ENST00000301717 TELO2Q9Y4R8 837 aa20.88■□□□□ 0.93
SPSB3-201ENST00000301717 GRIN2DO15399 1336 aa20.88■□□□□ 0.93
SPSB3-201ENST00000301717 RBM25P49756 843 aaKnown RBP20.87■□□□□ 0.93
SPSB3-201ENST00000301717 CLK2P49760 499 aaKnown RBP20.87■□□□□ 0.93
SPSB3-201ENST00000301717 SH3RF1Q7Z6J0 888 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 TRIM22Q8IYM9 498 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 ANO3Q9BYT9 981 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 PRDM5Q9NQX1 630 aaPredicted RBP20.87■□□□□ 0.93
SPSB3-201ENST00000301717 GJB4Q9NTQ9 266 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 KIAA1217Q5T5P2 1943 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 A6NJR5 290 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 GGPS1O95749 300 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 ITGB5P18084 799 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 CPT1AP50416 773 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 PURAQ00577 322 aaKnown RBP20.87■□□□□ 0.93
SPSB3-201ENST00000301717 CYP2W1Q8TAV3 490 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 ZMYND12Q9H0C1 365 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 PKD2L1Q9P0L9 805 aa20.87■□□□□ 0.93
SPSB3-201ENST00000301717 RBM27Q9P2N5 1060 aaKnown RBP20.87■□□□□ 0.93
SPSB3-201ENST00000301717 MMP3P08254 477 aa20.86■□□□□ 0.93
SPSB3-201ENST00000301717 CHMP4BP1P59074 171 aa20.86■□□□□ 0.93
SPSB3-201ENST00000301717 CPLX2Q6PUV4 134 aaKnown RBP20.86■□□□□ 0.93
SPSB3-201ENST00000301717 CHRDL2Q6WN34 429 aa20.86■□□□□ 0.93
SPSB3-201ENST00000301717 DHX37Q8IY37 1157 aaKnown RBP20.86■□□□□ 0.93
SPSB3-201ENST00000301717 GTF3C6Q969F1 213 aa20.86■□□□□ 0.93
SPSB3-201ENST00000301717 ELP1O95163 1332 aa20.85■□□□□ 0.93
SPSB3-201ENST00000301717 ESYT2A0FGR8 921 aa20.85■□□□□ 0.93
SPSB3-201ENST00000301717 SPATA31C2B4DYI2 1134 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms