RNA–Protein interactions for RNA: ENST00000301671.12

GHDC-201, Transcript of GH3 domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GHDC, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-201ENST00000301671 KIAA1551Q9HCM1 1747 aa17.71■□□□□ 0.43
GHDC-201ENST00000301671 FRMPD2Q68DX3 1309 aaPredicted RBP17.7■□□□□ 0.42
GHDC-201ENST00000301671 ATP1A2P50993 1020 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 TTMPQ5BVD1 217 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 SOGA3Q5TF21 947 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 GALNT17Q6IS24 598 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 BCAS4Q8TDM0 211 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 BAP1Q92560 729 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 ALS2CR12Q96Q35 445 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 KRT14P02533 472 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 FAM153BP0C7A2 387 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 HNRNPH3P31942 346 aaKnown RBP17.7■□□□□ 0.42
GHDC-201ENST00000301671 MAN2A1Q16706 1144 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 FAM153CQ494X1 144 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 KLHDC7AQ5VTJ3 777 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 C8orf74Q6P047 294 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 IFT81Q8WYA0 676 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 STIM2Q9P246 746 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 FAM153AQ9UHL3 310 aa17.7■□□□□ 0.42
GHDC-201ENST00000301671 SHOX2O60902 331 aaPredicted RBP17.69■□□□□ 0.42
GHDC-201ENST00000301671 FTCDO95954 541 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 GLI1P08151 1106 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 TRADDQ15628 312 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 CLEC4GQ6UXB4 293 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 NBPF5PQ86XG9 351 aaPredicted RBP17.69■□□□□ 0.42
GHDC-201ENST00000301671 MICALL1Q8N3F8 863 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 MAGEF1Q9HAY2 307 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 ANKIB1Q9P2G1 1089 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 CASZ1Q86V15 1759 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 PAFAH1B1P43034 410 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
GHDC-201ENST00000301671 LIG3P49916 1009 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 KCNMA1Q12791 1236 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 CALCRLQ16602 461 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 PTPROQ16827 1216 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 LARP4BQ92615 738 aaKnown RBP17.69■□□□□ 0.42
GHDC-201ENST00000301671 EYA3Q99504 573 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 NFU1Q9UMS0 254 aa17.69■□□□□ 0.42
GHDC-201ENST00000301671 LAMB1P07942 1786 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 USP17L5A8MUK1 530 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 TCP1P17987 556 aaKnown RBP17.68■□□□□ 0.42
GHDC-201ENST00000301671 GUCY2FP51841 1108 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 PDCLQ13371 301 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 REXO1Q8N1G1 1221 aaKnown RBP17.68■□□□□ 0.42
GHDC-201ENST00000301671 DDX12PQ92771 950 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 ZIM3Q96PE6 472 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 FGFBP2Q9BYJ0 223 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 SEC63Q9UGP8 760 aaKnown RBP17.68■□□□□ 0.42
GHDC-201ENST00000301671 SSBP05455 408 aaKnown RBP eCLIP17.68■□□□□ 0.42
GHDC-201ENST00000301671 EIF6P56537 245 aaKnown RBP17.68■□□□□ 0.42
GHDC-201ENST00000301671 PPFIA1Q13136 1202 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 PDXDC1Q6P996 788 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 LRRC55Q6ZSA7 311 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 UNC13DQ70J99 1090 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 PTF1AQ7RTS3 328 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 DNAAF5Q86Y56 855 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 GRIN2DO15399 1336 aa17.68■□□□□ 0.42
GHDC-201ENST00000301671 EDIL3O43854 480 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 GNA11P29992 359 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 CDK8P49336 464 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
GHDC-201ENST00000301671 ECM1Q16610 540 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 HGSNATQ68CP4 663 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 CLEC10AQ8IUN9 316 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 SNX29Q8TEQ0 813 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 CEP95Q96GE4 821 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 RUFY1Q96T51 708 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 MYH1P12882 1939 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 EPHB4P54760 987 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 SPTY2D1Q68D10 685 aaPredicted RBP17.67■□□□□ 0.42
GHDC-201ENST00000301671 PROCA1Q8NCQ7 364 aaPredicted RBP17.67■□□□□ 0.42
GHDC-201ENST00000301671 PPM1EQ8WY54 764 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 ANKRD2Q9GZV1 360 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 EPB41L5Q9HCM4 733 aa17.67■□□□□ 0.42
GHDC-201ENST00000301671 TLR2O60603 784 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 PALMO75781 387 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 LCA5LO95447 670 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 GUCY2DQ02846 1103 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 ASTE1Q2TB18 679 aaPredicted RBP17.66■□□□□ 0.42
GHDC-201ENST00000301671 CCDC84Q86UT8 332 aaPredicted RBP17.66■□□□□ 0.42
GHDC-201ENST00000301671 NELFCDQ8IXH7 590 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 CCDC43Q96MW1 224 aaKnown RBP17.66■□□□□ 0.42
GHDC-201ENST00000301671 NOX5Q96PH1 765 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 SPZ1Q9BXG8 430 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 FAM169AQ9Y6X4 670 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 TRAF5O00463 557 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 ZEB2O60315 1214 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 HSF2BPO75031 334 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 PRLRP16471 622 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 POLR2FP61218 127 aaKnown RBP17.66■□□□□ 0.42
GHDC-201ENST00000301671 ZNF572Q7Z3I7 529 aaPredicted RBP17.66■□□□□ 0.42
GHDC-201ENST00000301671 MTMR9Q96QG7 549 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 SETDB2Q96T68 719 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 SH3GL2Q99962 352 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.66■□□□□ 0.42
GHDC-201ENST00000301671 PACSIN1Q9BY11 444 aa17.66■□□□□ 0.42
GHDC-201ENST00000301671 COL22A1Q8NFW1 1626 aaPredicted RBP17.66■□□□□ 0.42
GHDC-201ENST00000301671 EBAG9O00559 213 aa17.65■□□□□ 0.42
GHDC-201ENST00000301671 EIF3HO15372 352 aaKnown RBP eCLIP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms