RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 DACT2Q5SW24 774 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ARMCX5Q6P1M9 558 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 AGBL3Q8NEM8 1001 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 HPS3Q969F9 1004 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 AK8Q96MA6 479 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 WDR11Q9BZH6 1224 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ALDH8A1Q9H2A2 487 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-201ENST00000299267 SLC5A4Q9NY91 659 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 MYO6Q9UM54 1294 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 XRN1Q8IZH2 1706 aaKnown RBP11.25□□□□□ -0.61
GABRB3-201ENST00000299267 WNT10BO00744 389 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 PPP1R2P41236 205 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 BAATQ14032 418 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-201ENST00000299267 SPATA1Q5VX52 437 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 APOBEC3HQ6NTF7 200 aaKnown RBP11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ZNF280CQ8ND82 737 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 SLC7A3Q8WY07 619 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 IQCA1LA6NCM1 817 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 SRGAP2CP0DJJ0 459 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 KMT5BQ4FZB7 885 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 TAX1BP1Q86VP1 789 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ANKRD13CQ8N6S4 541 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 POMGNT1Q8WZA1 660 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 SPC25Q9HBM1 224 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 LTN1O94822 1766 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 hCG_1984214I3L0E3 225 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ERLIN1O75477 346 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 KRT83P78385 493 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 MAP1SQ66K74 1059 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-201ENST00000299267 IQCEQ6IPM2 695 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 PDCL2Q8N4E4 241 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 ZNF713Q8N859 430 aaPredicted RBP11.25□□□□□ -0.61
GABRB3-201ENST00000299267 VCPKMTQ9H867 229 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
GABRB3-201ENST00000299267 GSTTP1A0A1W2PQM5 241 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 TRIM49BA6NDI0 452 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 GOLGA6L9A6NEM1 432 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 TACC1O75410 805 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 CCND2P30279 289 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 DDX12PQ92771 950 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 ATP6V0A1Q93050 837 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 ATG4CQ96DT6 458 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 RRAGDQ9NQL2 400 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 NYAP2Q9P242 653 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 TNFAIP3P21580 790 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 DMP1Q13316 513 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 RESP18Q5W5W9 173 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 FMR1NBQ8N0W7 255 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 NACC1Q96RE7 527 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 TUBGCP2Q9BSJ2 902 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 LSM14BQ9BX40 385 aaKnown RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 AKT3Q9Y243 479 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 IPO5O00410 1097 aaKnown RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 NEFHP12036 1026 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 MAP3K9P80192 1104 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 KLHL30Q0D2K2 578 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 COG2Q14746 738 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 CCDC125Q86Z20 511 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 CNOT6LQ96LI5 555 aaKnown RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 FAM49AQ9H0Q0 323 aaPredicted RBP11.24□□□□□ -0.61
GABRB3-201ENST00000299267 TMEM60Q9H2L4 133 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 NRBP2Q9NSY0 501 aa11.24□□□□□ -0.61
GABRB3-201ENST00000299267 GOLGA8IPA6NC78 632 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 GOLGA8JA6NMD2 632 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 ARL6IP4Q66PJ3 421 aaKnown RBP11.23□□□□□ -0.61
GABRB3-201ENST00000299267 SLC30A10Q6XR72 485 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 SESTD1Q86VW0 696 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 DYDC2Q96IM9 177 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 IL17RBQ9NRM6 502 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 PODXL2Q9NZ53 605 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 CNTNAP5Q8WYK1 1306 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 PEX3P56589 373 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 POLR2FP61218 127 aaKnown RBP11.23□□□□□ -0.61
GABRB3-201ENST00000299267 KIF22Q14807 665 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 TMCO3Q6UWJ1 677 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 PPM1KQ8N3J5 372 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 PHF20Q9BVI0 1012 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 MAGEA1P43355 309 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 TRIML1Q8N9V2 468 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 NLRP4Q96MN2 994 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 EMILIN3Q9NT22 766 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 ABCB4P21439 1286 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 RCAN1P53805 252 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 PLCB3Q01970 1234 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 NSUN6Q8TEA1 469 aaKnown RBP11.23□□□□□ -0.61
GABRB3-201ENST00000299267 PLEKHA4Q9H4M7 779 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 STK24Q9Y6E0 443 aa11.23□□□□□ -0.61
GABRB3-201ENST00000299267 BCL9LQ86UU0 1499 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 CTAGE9A4FU28 777 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 AP3B2Q13367 1082 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 SEC23AQ15436 765 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 RIC1Q4ADV7 1423 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 STXBP3O00186 592 aa11.22□□□□□ -0.61
GABRB3-201ENST00000299267 VEGFAP15692 232 aaPredicted RBP11.22□□□□□ -0.61
GABRB3-201ENST00000299267 CAP2P40123 477 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms