RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 FBXO16Q8IX29 292 aaPredicted RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 FOXP1Q9H334 677 aaPredicted RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 FOXD4L1Q9NU39 408 aa15.11■□□□□ 0.01
CCDC42-201ENST00000293845 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
CCDC42-201ENST00000293845 RBM47A0AV96 593 aaKnown RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 BTBD18B2RXH4 712 aa15.11■□□□□ 0.01
CCDC42-201ENST00000293845 MYCLP12524 364 aaPredicted RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 NONOQ15233 471 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 PRAMEF19Q5SWL8 479 aa15.11■□□□□ 0.01
CCDC42-201ENST00000293845 TAPT1Q6NXT6 567 aa15.11■□□□□ 0.01
CCDC42-201ENST00000293845 INPP4AQ96PE3 977 aaPredicted RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 HMX1Q9NP08 348 aaPredicted RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 ZHX1Q9UKY1 873 aaPredicted RBP15.11■□□□□ 0.01
CCDC42-201ENST00000293845 SEPT4O43236 478 aa15.1■□□□□ 0.01
CCDC42-201ENST00000293845 RGS20O76081 388 aa15.1■□□□□ 0.01
CCDC42-201ENST00000293845 U2AF2P26368 475 aaKnown RBP eCLIP15.1■□□□□ 0.01
CCDC42-201ENST00000293845 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
CCDC42-201ENST00000293845 EEPD1Q7L9B9 569 aa15.1■□□□□ 0.01
CCDC42-201ENST00000293845 TBCKQ8TEA7 893 aa15.1■□□□□ 0.01
CCDC42-201ENST00000293845 PAK6Q9NQU5 681 aaPredicted RBP15.1■□□□□ 0.01
CCDC42-201ENST00000293845 UBIAD1Q9Y5Z9 338 aa15.1■□□□□ 0.01
CCDC42-201ENST00000293845 DOCK5Q9H7D0 1870 aa15.1■□□□□ 0.01
CCDC42-201ENST00000293845 H3BQV1 296 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 EDIL3O43854 480 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 PDIA4P13667 645 aaKnown RBP15.09■□□□□ 0.01
CCDC42-201ENST00000293845 AKR1A1P14550 325 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 SYT1P21579 422 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 ICAM3P32942 547 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 CIITAP33076 1130 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
CCDC42-201ENST00000293845 USP11P51784 963 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 MTFR1Q15390 333 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 CCDC144BQ3MJ40 725 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 GNPTABQ3T906 1256 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 EARS2Q5JPH6 523 aaKnown RBP15.09■□□□□ 0.01
CCDC42-201ENST00000293845 IFFO2Q5TF58 517 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 MOXD1Q6UVY6 613 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 PIK3AP1Q6ZUJ8 805 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 SCFD2Q8WU76 684 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC42-201ENST00000293845 UNC93B1Q9H1C4 597 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 TSHZ2Q9NRE2 1034 aa15.09■□□□□ 0.01
CCDC42-201ENST00000293845 MYH15Q9Y2K3 1946 aa15.08■□□□□ 0.01
CCDC42-201ENST00000293845 KIF28PB7ZC32 967 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 MSCO60682 206 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 CCL5P13501 91 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 ITGB5P18084 799 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 ADCYAP1R1P41586 468 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 INF2Q27J81 1249 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 CEP55Q53EZ4 464 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 IQSEC1Q6DN90 963 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 NIPA1Q7RTP0 329 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 NLRX1Q86UT6 975 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 GPRASP2Q96D09 838 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 MXRA8Q9BRK3 442 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 JADE2Q9NQC1 790 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 PDGFCQ9NRA1 345 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 FAM184BQ9ULE4 1060 aa15.08■□□□□ 0
CCDC42-201ENST00000293845 IGLV3-22A0A075B6J6 115 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 FAM205CA6NFA0 338 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 MEIS1O00470 390 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 MAFGO15525 162 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 FIBPO43427 364 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 TGFB3P10600 412 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 TTLL4Q14679 1199 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 CCDC62Q6P9F0 684 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 KCNV1Q6PIU1 500 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 SEPT14Q6ZU15 432 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 NEK8Q86SG6 692 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 NOSTRINQ8IVI9 506 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 ZFP91Q96JP5 570 aaPredicted RBP15.07■□□□□ 0
CCDC42-201ENST00000293845 MBOAT7Q96N66 472 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 RNF208Q9H0X6 261 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 RTEL1Q9NZ71 1219 aa15.07■□□□□ 0
CCDC42-201ENST00000293845 DDX20Q9UHI6 824 aaKnown RBP15.07■□□□□ 0
CCDC42-201ENST00000293845 CYP3A7-CYP3A51PA0A087WV96 503 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 VPS37CA5D8V6 355 aaPredicted RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 SPATA31C2B4DYI2 1134 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 FAM86B1E9PN63 330 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 NKRFO15226 690 aaKnown RBP eCLIP15.06■□□□□ 0
CCDC42-201ENST00000293845 ADCY6O43306 1168 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 STX6O43752 255 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 ARIH2O95376 493 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 FAM86B2P0C5J1 330 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 CYP3A7P24462 503 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 CNGA1P29973 690 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 SETQ01105 290 aaPredicted RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 SEMA3FQ13275 785 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 GNL2Q13823 731 aaKnown RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 DUSP28Q4G0W2 176 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 SPRYD3Q8NCJ5 442 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 CDHR1Q96JP9 859 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 NAP1L4Q99733 375 aaKnown RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 WDR11Q9BZH6 1224 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 DDX41Q9UJV9 622 aaKnown RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 MTMR6Q9Y217 621 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 GNEQ9Y223 722 aaKnown RBP15.06■□□□□ 0
CCDC42-201ENST00000293845 MRVI1Q9Y6F6 885 aa15.06■□□□□ 0
CCDC42-201ENST00000293845 DUSP11O75319 330 aaKnown RBP15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms