RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 PVALEFA0A1B0GWK0 134 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 G3V3G9 751 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 SLC16A2P36021 539 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 BRD3Q15059 726 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 CCDC122Q5T0U0 273 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 DCAF8Q5TAQ9 597 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 RAD54LQ92698 747 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 TEKT1Q969V4 418 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 ERGIC2Q96RQ1 377 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 PNKPQ96T60 521 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 ZNHIT6Q9NWK9 470 aaKnown RBP16.79■□□□□ 0.28
CCDC116-201ENST00000292779 CTAGE15A4D2H0 777 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 CTAGE8P0CG41 777 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 KRT83P78385 493 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 AOC3Q16853 763 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 LONRF2Q1L5Z9 754 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 KRT79Q5XKE5 535 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 PPP1R18Q6NYC8 613 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 HHIPL2Q6UWX4 724 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 KCNK18Q7Z418 384 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 CTAGE6Q86UF2 777 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 CTAGE4Q8IX94 777 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 MSANTD4Q8NCY6 345 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 UBXN6Q9BZV1 441 aa16.79■□□□□ 0.28
CCDC116-201ENST00000292779 NHEJ1Q9H9Q4 299 aaPredicted RBP16.79■□□□□ 0.28
CCDC116-201ENST00000292779 GREB1LQ9C091 1923 aaPredicted RBP16.78■□□□□ 0.28
CCDC116-201ENST00000292779 PSMD14O00487 310 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 POLD1P28340 1107 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 CLK2P49760 499 aaKnown RBP16.78■□□□□ 0.28
CCDC116-201ENST00000292779 CCDC96Q2M329 555 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 FKBP15Q5T1M5 1219 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 NCAPH2Q6IBW4 605 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 KCTD1Q719H9 257 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 KIAA1328Q86T90 577 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 TMX4Q9H1E5 349 aaPredicted RBP16.78■□□□□ 0.28
CCDC116-201ENST00000292779 ARFGEF1Q9Y6D6 1849 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 MYO3BQ8WXR4 1341 aa16.78■□□□□ 0.28
CCDC116-201ENST00000292779 USP17L10C9JJH3 530 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 POTEB2H3BUK9 544 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 ENC1O14682 589 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 HLA-DOAP06340 250 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 CYLC1P35663 651 aaPredicted RBP16.77■□□□□ 0.28
CCDC116-201ENST00000292779 TUBB4BP68371 445 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 PPP4R3AQ6IN85 833 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 CUL5Q93034 780 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 GJA10Q969M2 543 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 DDX25Q9UHL0 483 aaKnown RBP16.77■□□□□ 0.28
CCDC116-201ENST00000292779 RAB21Q9UL25 225 aa16.77■□□□□ 0.28
CCDC116-201ENST00000292779 RHOXF2BP0C7M4 288 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 IDEP14735 1019 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 ECM1Q16610 540 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 TMEM119Q4V9L6 283 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 FIGNQ5HY92 759 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 DDX12PQ92771 950 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 HAS1Q92839 578 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 JAKMIP2Q96AA8 810 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 RHOXF2Q9BQY4 288 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 HDAC6Q9UBN7 1215 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 PCDHAC2Q9Y5I4 1007 aa16.77■□□□□ 0.27
CCDC116-201ENST00000292779 A0A1W2PQJ5 194 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 RCCD1A6NED2 376 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 EIF3CLB5ME19 914 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 ZBTB5O15062 677 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 POLR3GO15318 223 aaPredicted RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 CRKP46108 304 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 CACNB3P54284 484 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 SMC1AQ14683 1233 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 VWA3BQ502W6 1294 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 GPATCH4Q5T3I0 446 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 ZNF662Q6ZS27 426 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 TRAPPC11Q7Z392 1133 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 CCDC170Q8IYT3 715 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 GUF1Q8N442 669 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 EIF3CQ99613 913 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 DNAJC18Q9H819 358 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 MRPL12P52815 198 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 NOA1Q8NC60 698 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 GLIS3Q8NEA6 775 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 HNRNPLLQ8WVV9 542 aaKnown RBP16.76■□□□□ 0.27
CCDC116-201ENST00000292779 LACRTQ9GZZ8 138 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 NDST4Q9H3R1 872 aa16.76■□□□□ 0.27
CCDC116-201ENST00000292779 FAM196BA6NMK8 535 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 YDJCA8MPS7 323 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 KRT86O43790 486 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 ATP1A1P05023 1023 aaKnown RBP16.75■□□□□ 0.27
CCDC116-201ENST00000292779 TCP10Q12799 353 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 LRRC41Q15345 812 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 KIAA0825Q8IV33 1275 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 PSTPIP2Q9H939 334 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 ZNF277Q9NRM2 450 aaPredicted RBP16.75■□□□□ 0.27
CCDC116-201ENST00000292779 SIK3Q9Y2K2 1263 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 IPO7O95373 1038 aaKnown RBP16.75■□□□□ 0.27
CCDC116-201ENST00000292779 OAS2P29728 719 aaKnown RBP16.75■□□□□ 0.27
CCDC116-201ENST00000292779 CDK17Q00537 523 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 CYP27A1Q02318 531 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 EHHADHQ08426 723 aa16.75■□□□□ 0.27
CCDC116-201ENST00000292779 SHROOM1Q2M3G4 852 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms