RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 ERCC5P28715 1186 aaPredicted RBP18.88■□□□□ 0.61
CPSF4-201ENST00000292476 MAP2K2P36507 400 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 NCBP1Q09161 790 aaKnown RBP18.88■□□□□ 0.61
CPSF4-201ENST00000292476 USH1GQ495M9 461 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 CCDC84Q86UT8 332 aaPredicted RBP18.88■□□□□ 0.61
CPSF4-201ENST00000292476 SAMD3Q8N6K7 520 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 TSC1Q92574 1164 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 TMX1Q9H3N1 280 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 EHMT1Q9H9B1 1298 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 TMEM260Q9NX78 707 aa18.88■□□□□ 0.61
CPSF4-201ENST00000292476 OR52Z1P0C646 297 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 ATP1A3P13637 1013 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 VCAM1P19320 739 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 MOXD1Q6UVY6 613 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 RAB34Q9BZG1 259 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 TANGO6Q9C0B7 1094 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 EMILIN3Q9NT22 766 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 SERTAD1Q9UHV2 236 aa18.87■□□□□ 0.61
CPSF4-201ENST00000292476 WNT7AO00755 349 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 MEIS2O14770 477 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 ZBED4O75132 1171 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 ICAM1P05362 532 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 ZNF18P17022 549 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 BMP6P22004 513 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 UBE2SQ16763 222 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 ANKRD13AQ8IZ07 590 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 SLC10A4Q96EP9 437 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 PPP1R13BQ96KQ4 1090 aa18.86■□□□□ 0.61
CPSF4-201ENST00000292476 CGNQ9P2M7 1197 aaKnown RBP18.86■□□□□ 0.61
CPSF4-201ENST00000292476 FLOT1O75955 427 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 MAP2K1Q02750 393 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-201ENST00000292476 ISM2Q6H9L7 571 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-201ENST00000292476 ERO1AQ96HE7 468 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 RPAP3Q9H6T3 665 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-201ENST00000292476 ELP3Q9H9T3 547 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 FANCLQ9NW38 375 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 MAP3K20Q9NYL2 800 aaKnown RBP18.85■□□□□ 0.61
CPSF4-201ENST00000292476 PPP1R9AQ9ULJ8 1098 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 GCOM1H8Y6P7 765 aaPredicted RBP18.85■□□□□ 0.61
CPSF4-201ENST00000292476 SLFN14P0C7P3 912 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 POLR2MP0CAP2 368 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 SNAP25P60880 206 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 GRIN1Q05586 938 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 TMEM266Q2M3C6 531 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 SH3D19Q5HYK7 790 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 CCDC174Q6PII3 467 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 SH3RF1Q7Z6J0 888 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 MCF2L2Q86YR7 1114 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 SYMPKQ92797 1274 aaKnown RBP18.85■□□□□ 0.61
CPSF4-201ENST00000292476 ANO3Q9BYT9 981 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 WBP1LQ9NX94 342 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 AFG3L2Q9Y4W6 797 aa18.85■□□□□ 0.61
CPSF4-201ENST00000292476 UNCXA6NJT0 531 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L15C9J2P7 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L13C9JLJ4 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L11C9JVI0 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L18D6R9N7 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L22D6RA61 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L17D6RBQ6 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L19D6RCP7 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L20D6RJB6 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L24Q0WX57 530 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 TBX2Q13207 712 aaPredicted RBP18.84■□□□□ 0.61
CPSF4-201ENST00000292476 VGLL4Q14135 290 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 CALCRLQ16602 461 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 USP17L6PQ6QN14 398 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 IQUBQ8NA54 791 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 L2HGDHQ9H9P8 463 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 SLC38A10Q9HBR0 1119 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 FBXO28Q9NVF7 368 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 TRMT1Q9NXH9 659 aaKnown RBP18.84■□□□□ 0.61
CPSF4-201ENST00000292476 CCPG1Q9ULG6 757 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 RABGAP1Q9Y3P9 1069 aa18.84■□□□□ 0.61
CPSF4-201ENST00000292476 FOXN1O15353 648 aa18.83■□□□□ 0.61
CPSF4-201ENST00000292476 SPECC1Q5M775 1068 aa18.83■□□□□ 0.61
CPSF4-201ENST00000292476 SPRYD7Q5W111 196 aa18.83■□□□□ 0.61
CPSF4-201ENST00000292476 ZNF592Q92610 1267 aa18.83■□□□□ 0.61
CPSF4-201ENST00000292476 MAF1Q9H063 256 aa18.83■□□□□ 0.61
CPSF4-201ENST00000292476 MYPNQ86TC9 1320 aa18.83■□□□□ 0.61
CPSF4-201ENST00000292476 PHLPP2Q6ZVD8 1323 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 CYP3A7-CYP3A51PA0A087WV96 503 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 GOLGA6L9A6NEM1 432 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 ARHGAP6O43182 974 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 PRR29P0C7W0 189 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 CYP3A7P24462 503 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 UBA7P41226 1012 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 OAZ1P54368 228 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 PPATQ06203 517 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 COG2Q14746 738 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 CNKSR2Q8WXI2 1034 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 WNK4Q96J92 1243 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 GSDMAQ96QA5 445 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 BEGAINQ9BUH8 593 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 CCSER1Q9C0I3 900 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 HOXC10Q9NYD6 342 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 DDX25Q9UHL0 483 aaKnown RBP18.82■□□□□ 0.6
CPSF4-201ENST00000292476 NFE2L3Q9Y4A8 694 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 SNCAIPQ9Y6H5 919 aa18.82■□□□□ 0.6
CPSF4-201ENST00000292476 MARCH6O60337 910 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms