RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 A0A1W2PQ27 194 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 A0A1W2PQ64 194 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 A0A1W2PQD8 194 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 JAKMIP3Q5VZ66 844 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 CPXCR1Q8N123 301 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 MSL3Q8N5Y2 521 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 ANKRD20A12PQ8NF67 263 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 TXNRD2Q9NNW7 524 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 PXMP2Q9NR77 195 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 DIS3Q9Y2L1 958 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 DNAJC25-GNG10A0A024R161 153 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 ADAMTS3O15072 1205 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 SKOR2Q2VWA4 1001 aaPredicted RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 USP17L6PQ6QN14 398 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 C4orf32Q8N8J7 132 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 ADD3Q9UEY8 706 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 RIPK3Q9Y572 518 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 CFBP00751 764 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 CYP2C8P10632 490 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 PRKCSHP14314 528 aaPredicted RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 ERCC3P19447 782 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 CCND2P30279 289 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 TAF1CQ15572 869 aaPredicted RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 INF2Q27J81 1249 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 SLFN12Q8IYM2 578 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 RASGRP4Q8TDF6 673 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 MMP19Q99542 508 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 A1CFQ9NQ94 594 aaKnown RBP9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 CLIC4Q9Y696 253 aa9.54□□□□□ -0.88
PTPDC1-201ENST00000288976 SPTLC2O15270 562 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 CUTAO60888 179 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 RPS6P62753 249 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 ARHGAP4P98171 946 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 GRB14Q14449 540 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 STK38Q15208 465 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 SLC30A10Q6XR72 485 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 EP400NLQ6ZTU2 488 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 SRPRBQ9Y5M8 271 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 FAM237AA0A1B0GTK4 181 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 SLC15A5A6NIM6 579 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 FCER1AP12319 257 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 EDNRBP24530 442 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 UBE2HP62256 183 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 MKRN3Q13064 507 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 PLS1Q14651 629 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 PGM5Q15124 567 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 NSUN6Q8TEA1 469 aaKnown RBP9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 PAGR1Q9BTK6 254 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 PCDHB6Q9Y5E3 794 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 NEMFO60524 1076 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 KCTD2Q14681 263 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 CYP4F22Q6NT55 531 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 NCAPG2Q86XI2 1143 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 FAM133AQ8N9E0 248 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 AK8Q96MA6 479 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 KCNMB3Q9NPA1 279 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 LOXHD1Q8IVV2 1947 aa9.53□□□□□ -0.88
PTPDC1-201ENST00000288976 FAM205CA6NFA0 338 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 MAFGO15525 162 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 MBD3O95983 291 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 ADALQ6DHV7 355 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 GPRASP2Q96D09 838 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 MTMR9Q96QG7 549 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 PYM1Q9BRP8 204 aaKnown RBP9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 LMBRD1Q9NUN5 540 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 DDX25Q9UHL0 483 aaKnown RBP9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 UBIAD1Q9Y5Z9 338 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 TCHHQ07283 1943 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 KIAA1217Q5T5P2 1943 aa9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 PTPRZ1P23471 2315 aaPredicted RBP9.52□□□□□ -0.88
PTPDC1-201ENST00000288976 CCNT1O60563 726 aaKnown RBP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 LONP1P36776 959 aaKnown RBP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 FXR2P51116 673 aaKnown RBP eCLIP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 KCTD17Q8N5Z5 321 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 SLC5A4Q9NY91 659 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 COL20A1Q9P218 1284 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 FBXO2Q9UK22 296 aaPredicted RBP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 EDIL3O43854 480 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 PTPREP23469 700 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 HOXA13P31271 388 aaPredicted RBP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 SOCS4Q8WXH5 440 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 FAM20AQ96MK3 541 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 BAZ2BQ9UIF8 2168 aaKnown RBP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 IGLV3-22A0A075B6J6 115 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 OR52Z1P0C646 297 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 BAATQ14032 418 aaPredicted RBP9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 ARHGEF16Q5VV41 709 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 CCDC73Q6ZRK6 1079 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 PLEKHH3Q7Z736 793 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 ANKRD35Q8N283 1001 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 HOMER2Q9NSB8 354 aa9.52□□□□□ -0.89
PTPDC1-201ENST00000288976 GNRH1P01148 92 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 TAL1P17542 331 aaPredicted RBP9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 MORN1Q5T089 497 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ANKRD13CQ8N6S4 541 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 CDHR1Q96JP9 859 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 PDCD2LQ9BRP1 358 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ZNFX1Q9P2E3 1918 aaKnown RBP9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ICAM3P32942 547 aa9.51□□□□□ -0.89
PTPDC1-201ENST00000288976 ALDH5A1P51649 535 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms